| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1362 |
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| Symbol | |
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| ID | 7973043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1482367 |
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| End bp | 1483467 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791960 |
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| Product | histidine kinase internal region |
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| Protein accession | YP_002943279 |
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| Protein GI | 239814369 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.186679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTGGT TACCCGATGT ATCAGTGATG CGCAATCCGG CGATTTTATC GGCCACCTCC
ACCCCCACGC CCCCGGCCCC GCCGGAAAGA GGGCGTTTGG CCGCGCGCGG CAGCCCGGGG
CTGTTCGACG CTTGCCAGAT CGGGGTGGTG CTGCGCGCGG TGCTGTTCGT GGAGGCGCTG
GTGGCGGCCG CCACGCTGTT CGTGTCGGCT TCGCCCGGCG AATGGCTGGT GCAGACCGCC
ACCGTCACGG GCGGCGCGCT GCCCGCCACG CTGCTGTGGC TGGTGGCGGC CTGCGGGCTC
AAGAAGCCGC TCGGGCGACT GCCGCGCCAG GCGCAGTACG CGGCCGGCGC CGCGCTGGGT
GCCGTTTCCT CGCTCTATGG CTGCGGCCTG TTGCGGCTGA CCGGCGTGCT GGGCACGGCG
CCCTGGCTCG CGAGCGCCGT GGCGGGCGCC TTCGTCGCGG GCATGGTGAT GGCGGCGATG
GTGCTGCGCG CGCGCGGCCA GACGCCGGCC GCCATGACGG CCCGGCTGGA AGAGCTGCAG
TCGCGCATCC GCCCGCACTT CCTGTTCAAC ACGCTCAACA GCGCCATTGC GCTGGTGCGG
GAAGAACCCG CCAAGGCCGA GACCATGCTC GAAGACCTGG CCGAGCTGTT CCGCCAGGCG
CTGGCAGACC CGGGCGAATC GGGCACGCTG GCCGACGAGA TCGCGCTGGC CGAGCGCTAC
CTGGCCATAG AGCAGGTGCG CTTCGGCGAC CGGCTGCGCA TCCGCTGGGA CCTCGACGCC
GCGGCCAGCA GCGCGCGGCT GCCGCCATTG CTGCTGCAGC CGCTGGTCGA AAACGCCATC
AAGCACGGCG TGGAGCCCAG CCCCGAGGGC GCCAAGCTGC GCATCCGCAC CGAGCGCCGC
GGCAGCGTGG TGGTGATCGA GGTGGTCAAC AGCCTGCCGC CCTTGCGCTG GGCCGACGAG
CCCCTGCCGC GGGGCCATGG CATTGCGCTG GCCAACGTGC GCGACCGGCT GCGGCTCTTG
CACGACATGC AGATGCAGTT CAGCGCCGGC ATGGACCAGA AGAACTACCG CGTGCGCATT
GCCATTCCCG CCGAATCATG A
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| Protein sequence | MGWLPDVSVM RNPAILSATS TPTPPAPPER GRLAARGSPG LFDACQIGVV LRAVLFVEAL
VAAATLFVSA SPGEWLVQTA TVTGGALPAT LLWLVAACGL KKPLGRLPRQ AQYAAGAALG
AVSSLYGCGL LRLTGVLGTA PWLASAVAGA FVAGMVMAAM VLRARGQTPA AMTARLEELQ
SRIRPHFLFN TLNSAIALVR EEPAKAETML EDLAELFRQA LADPGESGTL ADEIALAERY
LAIEQVRFGD RLRIRWDLDA AASSARLPPL LLQPLVENAI KHGVEPSPEG AKLRIRTERR
GSVVVIEVVN SLPPLRWADE PLPRGHGIAL ANVRDRLRLL HDMQMQFSAG MDQKNYRVRI
AIPAES
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