| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1361 |
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| Symbol | |
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| ID | 7973042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1480947 |
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| End bp | 1482344 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791959 |
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| Product | argininosuccinate lyase |
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| Protein accession | YP_002943278 |
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| Protein GI | 239814368 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0165] Argininosuccinate lyase |
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| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.138182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAA ACCAACTCGA CAAGAAATCC GAAGCCTGGT CGGCCCTGTT CTCCGAACCC
ATGAGCGACC TCGTGAAGCG CTACACCGCG AGCGTCTTCT TCGACAAGCG CCTGTGGCAG
GCCGACATCG AGGGTTCCCT GGCACATGCC GGCATGCTGG CCGCGCAGGG CATCATCGGC
AAGCAGGACC ACGCCGAGAT CGAGCGTGGG ATGGCGCAGA TCCGCGCTGA AATCGAATCG
GGCGCCTTCG AGTGGAAACT CGACCTGGAA GACGTGCACC TGAACATCGA GGCCCGGCTG
ACCCAGCTCG TGGGCGACGC CGGCAAGCGC CTGCACACCG GCCGCAGCCG CAACGACCAG
GTTGCCACCG ACGTGCGCCT GTGGCTGCGC GGCGAGATCG ACCTGATCGC CGAGCTGCTG
GTGGCGCTGC AGCTGTCGCT GGTGGACATC GCCGAGAAGA ACGTCGAGGT CATCCTGCCC
GGCTTCACGC ACCTGCAGGT GGCGCAGCCC GTGAGCTTTG GCCACCACAT GCTGGCCTAC
GTGGAAATGT TCAGCCGCGA CGCCGAGCGC CTGCAGGACG TGCGCAAGCG CGTCAACCGC
CTGCCGCTGG GCGCCGCGGC GCTGGCCGGC ACCAGCTACC CGCTCGACCG CGAGCTGGTC
GCCAGAACGC TGAAGATGGA CGGCGTCTGC CAGAACAGCC TGGACGCCGT GAGCGACCGC
GACTTTGCGA TCGAGTTCAC CGCCGCGGCC AGCCTGTGCA TGGTGCACGT GAGCCGCATG
AGCGAGGAAC TGATCCTGTG GATGAGCCAG AACTTCGGCT TCATCCAGAT TGCCGACCGC
TTCACCACCG GCTCTTCGAT CATGCCGCAG AAGAAGAACC CCGACGTGCC CGAACTGGCC
CGCGGCAAGA CCGGCCGCGT GGTCGGCCAC CTGATGGCGC TCATCACCCT GATGAAGGGC
CAGCCGCTGG CCTACAACAA GGACAACCAG GAAGACAAGG AGCCGCTGTT CGACACCGTC
GACACGCTCA AGGACACGCT GCGGATCTTT GCCGAGATGA TCGGCGGCAT CACCGTGAAG
CCCGAGGCCA TGGAAGCCGC CGCGCTGCGC GGCTACGCCA CCGCCACCGA CCTGGCCGAC
TACCTCGTGA AGAAGGGCCT GCCCTTCCGC GACGCGCACG AAACCGTAGC CCACGCGGTG
AAGGCCGCCA CCTCGCACAA GGTCGACCTC GCGGAGCTGC CGCTGGCCGT GCTGCAGCAG
TTCAACCCGA ACATCGAGAA GGACGTGTAC GACGTGCTGA GCCTGCGCGG CTCGCTCAAC
GCGCGCAACA TCCTCGGCGG CACCGCGCCG GCGCAAGTGA AGGCGCAGAT CGCGCGCCAT
CGCGCCCGGC TGGCCTGA
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| Protein sequence | MTQNQLDKKS EAWSALFSEP MSDLVKRYTA SVFFDKRLWQ ADIEGSLAHA GMLAAQGIIG
KQDHAEIERG MAQIRAEIES GAFEWKLDLE DVHLNIEARL TQLVGDAGKR LHTGRSRNDQ
VATDVRLWLR GEIDLIAELL VALQLSLVDI AEKNVEVILP GFTHLQVAQP VSFGHHMLAY
VEMFSRDAER LQDVRKRVNR LPLGAAALAG TSYPLDRELV ARTLKMDGVC QNSLDAVSDR
DFAIEFTAAA SLCMVHVSRM SEELILWMSQ NFGFIQIADR FTTGSSIMPQ KKNPDVPELA
RGKTGRVVGH LMALITLMKG QPLAYNKDNQ EDKEPLFDTV DTLKDTLRIF AEMIGGITVK
PEAMEAAALR GYATATDLAD YLVKKGLPFR DAHETVAHAV KAATSHKVDL AELPLAVLQQ
FNPNIEKDVY DVLSLRGSLN ARNILGGTAP AQVKAQIARH RARLA
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