| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1354 |
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| Symbol | |
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| ID | 7973035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1468752 |
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| End bp | 1469273 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791952 |
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| Product | Appr-1-p processing domain protein |
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| Protein accession | YP_002943271 |
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| Protein GI | 239814361 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.640465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAAG CGCTTCGTGC CATCCGCGGC GACATCACCA CGCTGCAGGT CGATGCCATC
GTCAATGCGG CCAATTCCTC GCTGCTCGGC GGAGGCGGCG TCGATGGCGC CATCCACCGC
GCGGCGGGGC CCGAGCTCCT GCATGAATGC CGCCTGCTGT CGGGCTGCAA GACCGGCGAC
GCCAAGCTGA CCCGGGGCTA CCGGCTGCCG GCCCGCTTCG TCATCCACAC CGTCGGGCCA
GTCTGGCGCG GCGGTGCGAG CGGCGAGCCG GAGCTCTTGG CCTCGTGCTA CCGGAAGTCG
ATGGAAATCG CCGGGCAGCA CGGCGTTCGC ACCATTGCGT TCCCCTCGAT CAGCACGGGC
ATCTACGGCT ACCCGATCGA GCTCGCGGCG CCCATTGCGG TGGCCACGGT CCGATCGGCG
CTGGCCGCGA GTGCCAGCGT GCAGGAGGCC ACGTTCTGCT GCTTCTCGGA CGCGGACCTG
GCGGTGTACG AAGCGGCGCT TGCGGCGGCG GGGCCGGCAT AA
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| Protein sequence | MQKALRAIRG DITTLQVDAI VNAANSSLLG GGGVDGAIHR AAGPELLHEC RLLSGCKTGD
AKLTRGYRLP ARFVIHTVGP VWRGGASGEP ELLASCYRKS MEIAGQHGVR TIAFPSISTG
IYGYPIELAA PIAVATVRSA LAASASVQEA TFCCFSDADL AVYEAALAAA GPA
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