| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1349 |
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| Symbol | |
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| ID | 7973030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1464267 |
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| End bp | 1465337 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791947 |
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| Product | tRNA 2-selenouridine synthase |
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| Protein accession | YP_002943266 |
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| Protein GI | 239814356 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2603] Predicted ATPase |
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| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.462447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTAT ACAACCCGCG CCACCAGCCC ACGCGCGTGG CCGACCTGCA CCGCTTCGAC
ACCCTCATCG ACGCGCGCTC GCCCTCCGAA TTCGCGCTCG ACCACATTCC CGGCGCCATC
AACTGCCCGG TGCTCGACGA CGAGGAGCGC CGCATCGTCG GCACCATCTA CAAGCAGACC
GGCGCCTTCG AGGCGCGGCG CGTGGGCGGC GCCATGGTGG CCGCCAACCT CGCGCGGCAC
CTGCGCGAAC GCTTTGCCGA GCAGCCCGCC AACTGGCGCC CGCTCGTATA TTGCTGGCGC
GGGGGCTTGC GCAGCGGCTC GATGGTGACC TGGCTGCGCC TGGTCGGCTG GGACGCGCAG
CAGCTCGCCG GCGGCTACAA GAGCTATCGC CAGCACGTGC TGGCGCAGAT CGAGGCCACG
GTGCCCAGGC TCCGGCTCAA GGTGATCTGC GGCGCCACCG GCAGTGCCAA GACGCGTGTC
CTGCAGGCGC TGGCCGCGCG CGGCGAACAG GTGCTCGACC TGGAGCACTG CGCGAGCCAC
AAGGGCTCGC TGCTGGGCGC CCTGCCCGGC GTGCCGCAGC CCTCGCAAAA GCAGTTCGAG
ACGCGCATCG CCACCTGCTT CGATGCGCTC GATGTGTCAC GCACGCTCTA CGTGGAAGGC
GAAAGCGCGC GCATCGGCCG GCTCTCGGTG CCCATCCCGC TGGTCGCGCA CATGCGCGCG
GCCGACTGCA TCGAGGTGCA GGCCGACGCG GCCGCGCGGC TCGACTACCT GCTGCGCGAC
TACGCCTACC TGGGCGACGA CCGCGCCGCG CTGGCGGGCC AGCTCGACAG GCTCAAGGAA
ATGCAGGGCA AGGCGGTGGT GCAGCGCTGG CAGGAATGGG CGCTCGCGGG CAACCTGCCG
CAGCTCTTTG CCGAACTGAT GGCGCTTCAC TACGATCCGC ACTACGAACG CTCGCAGGCG
CGCCATTTCG AGAAGTGGCC GCTGCGCCAG CAGGTGGCGG CGCCCGACCT GACGGACGCG
GGAATCGACG CGGTGGCGGA GGCCATCCTG CGGTTGAACG CCGCAGGGTA G
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| Protein sequence | MTVYNPRHQP TRVADLHRFD TLIDARSPSE FALDHIPGAI NCPVLDDEER RIVGTIYKQT
GAFEARRVGG AMVAANLARH LRERFAEQPA NWRPLVYCWR GGLRSGSMVT WLRLVGWDAQ
QLAGGYKSYR QHVLAQIEAT VPRLRLKVIC GATGSAKTRV LQALAARGEQ VLDLEHCASH
KGSLLGALPG VPQPSQKQFE TRIATCFDAL DVSRTLYVEG ESARIGRLSV PIPLVAHMRA
ADCIEVQADA AARLDYLLRD YAYLGDDRAA LAGQLDRLKE MQGKAVVQRW QEWALAGNLP
QLFAELMALH YDPHYERSQA RHFEKWPLRQ QVAAPDLTDA GIDAVAEAIL RLNAAG
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