| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1348 |
|---|
| Symbol | |
|---|
| ID | 7973029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 1463808 |
|---|
| End bp | 1464233 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644791946 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_002943265 |
|---|
| Protein GI | 239814355 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.483715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACTCG AATGGCGCGA TTCGCTCGAA GGCCTCGACT GGGACGAACT CTCGCGGCTC
TATCAGGCCG CACCGCTGGG AAACAAGCAG CCGGGCGGCC TGAAGCTCGT GTTCGGCAAC
AGCATGTTCA AGTGCCTGGT GTTCGACGCG GGCCGGCTCG TCGGGGCGGG CCGCGCGATG
GCCGACGGGC TCGACTGCTC CTACATCTGC GACGTGGCGG TGCACCCGAG CCACCAGGGC
ATCGGCCTGG GCAGGCAGAT CGTCTCGCGG CTGCTGGAGC TCTCGCGCGG GCACCGCAAG
ATCATTCTCT ATGCGGTGGC CGGCAAGGAG CCCTTCTACG AGAAGCTCGG CTTCAGGCGC
ATGAAGACCG CGATGGCGAT CTTCGAGAAC CAGGCGCAGG CGGCCGAGCG CGGGCTGATC
GAGTGA
|
|---|
| Protein sequence | MTLEWRDSLE GLDWDELSRL YQAAPLGNKQ PGGLKLVFGN SMFKCLVFDA GRLVGAGRAM
ADGLDCSYIC DVAVHPSHQG IGLGRQIVSR LLELSRGHRK IILYAVAGKE PFYEKLGFRR
MKTAMAIFEN QAQAAERGLI E
|
|---|
| |