Gene Vapar_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1341 
Symbol 
ID7973022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1457548 
End bp1458828 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content72% 
IMG OID644791939 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002943258 
Protein GI239814348 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID[TIGR00896] cyanate transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.141692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGG TGGCATTCCG GACGGCCCGC GCCGCCGACG AACTGCTGAT CGACGCCGAG 
GCCGACAGCA CGCCCGCGCC GCGCCCCACG CCGGCGGACA GCCTGGGCCG GCGCATCCTG
CTGGGTGCGA GCGTGGTGCT GATCGCCTTC AACCTGCGGC CGGTGTTCGC CAGCCTGTCG
GTGGTGCTGC CGGAGATCAT CGCGGCCACC GGGCTCTCGG CCACCGCCGC GAGCCTGCTG
ACCACGCTGC CCATCGTCTG CCTGGGCGTG TTCGCGCCGC TGGCGCCGGG CCTGGGCCGG
CGCTTCGGCA CCGAGCGCAC GCTGCTCGCC TGCATGGTGC TCATCCTCGT GGGCACGCTG
CTGCGCGGCA CCGGCAGCAT CCCGCTGCTG TTCGTGGCCT CGGCCATCGC GGGCAGCGGC
ATCGCGGTGT CGAACGTGCT GCTCTCGGGC CTGGTGAAGC GCGACTTCGC CAGGCAGGCG
GCGCTGATGA TGGGCCTCTA CACCATGGCG GTGTGCGGCG GCGCGGCCAG CGCGGCGGGC
CTCACGGTGC CGCTCGAACA TGCGCTGGGC GGCGGCTGGA CCTATGCGCT GGCGATGTGG
GCGGTGCCTG CTCTGCTGGT CACGCTGATC TGGGCGCCGC AGGCGCTGCC GCTGAAGCCA
GTGGCCAGCG AATCGGGCTT CACCGTGCGC GGGCTGTGGC GCGACCGGCT GGCCTGGCAG
GTCACTTTCT TCATGGGCCT GCAATCGGCA CTGGCCTACA CCGTGATGGG CTGGCTCGCA
CCCATCCTGC GCGAACGCGG ACTCGGCGGC GAGACGGCCG GCTACGTCGT GTCGCTGGCG
GTCATGACGC AGGTGGTGAC CTGCCTCATC GTTCCCGCAG TGGCCGTGAG GCTGCGCAAC
CAGCGCGGGC TGGCGGTGGT GCTGGCCATT GTCACGGTGG CCGCCATGCT GGCGATGCTG
TTCGCACCGC TGGGCGGCGT GTGGCTGTGG GCCGTGCTGC TGGGCATTGC GCAGGGCGGC
ACCTTTGCGC TGGCGCTCAC CTTCATGGTG CTGCGCTCGC CCGATTCGCA CGTGGCGGCA
CACCTCTCGG GCATGGCGCA GGGCGTGGGC TACGTGGTGG CCGCCTGCGG GCCGCTGGTG
GCGGGCCTGC TGCACGGCTG GACCGGCAGC TTCCGCGCGT CGTCATGGCT CTTCATCGGG
CTGGGCATTG CGCTGGTGAT GGCGGGCCTT GGCGCGGGGC GCTCGATGCA CGTGGGCGCG
GTGACGGTTC CGCGGCACTG A
 
Protein sequence
MSAVAFRTAR AADELLIDAE ADSTPAPRPT PADSLGRRIL LGASVVLIAF NLRPVFASLS 
VVLPEIIAAT GLSATAASLL TTLPIVCLGV FAPLAPGLGR RFGTERTLLA CMVLILVGTL
LRGTGSIPLL FVASAIAGSG IAVSNVLLSG LVKRDFARQA ALMMGLYTMA VCGGAASAAG
LTVPLEHALG GGWTYALAMW AVPALLVTLI WAPQALPLKP VASESGFTVR GLWRDRLAWQ
VTFFMGLQSA LAYTVMGWLA PILRERGLGG ETAGYVVSLA VMTQVVTCLI VPAVAVRLRN
QRGLAVVLAI VTVAAMLAML FAPLGGVWLW AVLLGIAQGG TFALALTFMV LRSPDSHVAA
HLSGMAQGVG YVVAACGPLV AGLLHGWTGS FRASSWLFIG LGIALVMAGL GAGRSMHVGA
VTVPRH