Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1341 |
Symbol | |
ID | 7973022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1457548 |
End bp | 1458828 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644791939 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002943258 |
Protein GI | 239814348 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2807] Cyanate permease |
TIGRFAM ID | [TIGR00896] cyanate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.141692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGG TGGCATTCCG GACGGCCCGC GCCGCCGACG AACTGCTGAT CGACGCCGAG GCCGACAGCA CGCCCGCGCC GCGCCCCACG CCGGCGGACA GCCTGGGCCG GCGCATCCTG CTGGGTGCGA GCGTGGTGCT GATCGCCTTC AACCTGCGGC CGGTGTTCGC CAGCCTGTCG GTGGTGCTGC CGGAGATCAT CGCGGCCACC GGGCTCTCGG CCACCGCCGC GAGCCTGCTG ACCACGCTGC CCATCGTCTG CCTGGGCGTG TTCGCGCCGC TGGCGCCGGG CCTGGGCCGG CGCTTCGGCA CCGAGCGCAC GCTGCTCGCC TGCATGGTGC TCATCCTCGT GGGCACGCTG CTGCGCGGCA CCGGCAGCAT CCCGCTGCTG TTCGTGGCCT CGGCCATCGC GGGCAGCGGC ATCGCGGTGT CGAACGTGCT GCTCTCGGGC CTGGTGAAGC GCGACTTCGC CAGGCAGGCG GCGCTGATGA TGGGCCTCTA CACCATGGCG GTGTGCGGCG GCGCGGCCAG CGCGGCGGGC CTCACGGTGC CGCTCGAACA TGCGCTGGGC GGCGGCTGGA CCTATGCGCT GGCGATGTGG GCGGTGCCTG CTCTGCTGGT CACGCTGATC TGGGCGCCGC AGGCGCTGCC GCTGAAGCCA GTGGCCAGCG AATCGGGCTT CACCGTGCGC GGGCTGTGGC GCGACCGGCT GGCCTGGCAG GTCACTTTCT TCATGGGCCT GCAATCGGCA CTGGCCTACA CCGTGATGGG CTGGCTCGCA CCCATCCTGC GCGAACGCGG ACTCGGCGGC GAGACGGCCG GCTACGTCGT GTCGCTGGCG GTCATGACGC AGGTGGTGAC CTGCCTCATC GTTCCCGCAG TGGCCGTGAG GCTGCGCAAC CAGCGCGGGC TGGCGGTGGT GCTGGCCATT GTCACGGTGG CCGCCATGCT GGCGATGCTG TTCGCACCGC TGGGCGGCGT GTGGCTGTGG GCCGTGCTGC TGGGCATTGC GCAGGGCGGC ACCTTTGCGC TGGCGCTCAC CTTCATGGTG CTGCGCTCGC CCGATTCGCA CGTGGCGGCA CACCTCTCGG GCATGGCGCA GGGCGTGGGC TACGTGGTGG CCGCCTGCGG GCCGCTGGTG GCGGGCCTGC TGCACGGCTG GACCGGCAGC TTCCGCGCGT CGTCATGGCT CTTCATCGGG CTGGGCATTG CGCTGGTGAT GGCGGGCCTT GGCGCGGGGC GCTCGATGCA CGTGGGCGCG GTGACGGTTC CGCGGCACTG A
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Protein sequence | MSAVAFRTAR AADELLIDAE ADSTPAPRPT PADSLGRRIL LGASVVLIAF NLRPVFASLS VVLPEIIAAT GLSATAASLL TTLPIVCLGV FAPLAPGLGR RFGTERTLLA CMVLILVGTL LRGTGSIPLL FVASAIAGSG IAVSNVLLSG LVKRDFARQA ALMMGLYTMA VCGGAASAAG LTVPLEHALG GGWTYALAMW AVPALLVTLI WAPQALPLKP VASESGFTVR GLWRDRLAWQ VTFFMGLQSA LAYTVMGWLA PILRERGLGG ETAGYVVSLA VMTQVVTCLI VPAVAVRLRN QRGLAVVLAI VTVAAMLAML FAPLGGVWLW AVLLGIAQGG TFALALTFMV LRSPDSHVAA HLSGMAQGVG YVVAACGPLV AGLLHGWTGS FRASSWLFIG LGIALVMAGL GAGRSMHVGA VTVPRH
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