| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1336 |
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| Symbol | |
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| ID | 7973017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1452431 |
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| End bp | 1453183 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791934 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002943253 |
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| Protein GI | 239814343 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAA TCCAGGAAAA AGTCGTCCTC ATCACGGGCG CAAGTGGTGG CATTGGCGCG
GCGGCCGCGC GGCTCCTGGC GCGGCGCGGC GCCAAGGTGG TGCTCGGCGC GCGCCGCACC
GACCGGCTCG AAGCGCTGGC CGAGGAAATC ACCGCCGCCG GCGGCACCGC GCACTTCCAG
CGGCTGGACG TCACCTACCG GCCCGACGTG GAAGCATTTG CCGAATTCGC ACTCGAAACG
CACGACCGCA TCGACGTGCT GGTGAACGCC GCGGGCGTGA TGCCGCTGTC GCCGCTGTGG
ACCCGCAAGG TCGACGAATG GGAGCTGATG CTCGACGTCA ACCTGCGCGG CGTGCTGCTG
GGCATTGCGG CGGTGCTGCC GACCATGCAG GAACAGGGCT GGGGCCACAT CGTCAACGTG
GCGCCGGTGC CCGCGCAGGG CGTGTCGCCG AACTCGGCCG TGTATTGCGG CACGCAGTAC
GCGGTGGACG CCATCTCCGA AGGCCTGCGG CAGGAGCATG CGGGCAAGCT GCGCGTGACG
GTGGTGCGCC CCGACGTGAG CGAAGCGGAC AGCACGCTGG CCGACCGCAT CGCGGCCTGC
AGCAGCTTCG AGCGCATGGT CACGCGGCGG CGCATCGCGG TGCCCGCGGA AGCCGTGGCA
CGCTCGATTG CGGGCGCCAT CGAGGGCAGC AGCATCTCGG CCCCGCGGCG CCCCGCGTGG
CGGCCAAGGC CGGCCGAGCA CGCGGCGTTC TGA
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| Protein sequence | MSAIQEKVVL ITGASGGIGA AAARLLARRG AKVVLGARRT DRLEALAEEI TAAGGTAHFQ
RLDVTYRPDV EAFAEFALET HDRIDVLVNA AGVMPLSPLW TRKVDEWELM LDVNLRGVLL
GIAAVLPTMQ EQGWGHIVNV APVPAQGVSP NSAVYCGTQY AVDAISEGLR QEHAGKLRVT
VVRPDVSEAD STLADRIAAC SSFERMVTRR RIAVPAEAVA RSIAGAIEGS SISAPRRPAW
RPRPAEHAAF
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