| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1332 |
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| Symbol | |
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| ID | 7973013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1449879 |
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| End bp | 1450763 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791930 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943249 |
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| Protein GI | 239814339 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCGA CGCGACTTCC CTCCACGCAG GGCCTGCAGG CCTTCGAGGC GGTGGCGCGC
CTGCGCAGCG TGAACATTGC AGCGGAAGAG CTCAGCGTCA CGCCCAGCGC GGTGAGCCAC
CGCATCCGCC AGCTCGAGAC GCTGCTCGAA CTCAGGCTTT TCACAGGCAA CGACTTCGGC
CTGAGCGCCG ACGGCGTGGC CTACCTGGCC CGCGTGCGCG AGGCCATTGC GGCGCTGCAG
CGGGTGCCCG GCCGCGAGCC CGCATCGCAG GTGCGCCGGC TGCGCGTGGC AGTGACGCCC
ACCTTCTCCC GCCAGATGCT GCTGCCCCGG CTCGCGCGGT TTCGCGATGC CTATCCGAAC
ATCGAGCTGA TGCTGCAGGT GACCATGCCG GTGCGCAACA TGACGGCCGA AGAGGCCGAC
CTGGAACTGC GCTTCGGCAC CGGGCCTTTT CACGACCGCG AGTTCTGCCA ATTGCTGGCC
GACGACGTCG CGCCCGCCTG CAGCCCGGCG TACCTGCAGC GCCACGGGCC GTTCGACGGC
TTTGCGACCG ATGCCGAGGC CTCGCGCGTG CAGCTGCTGC GCACGCCGCT CGAGTCGTGG
CGCACCTGGT TCAAGGCCCG CGGCATCGGC CTGCCGGAGC CGGCCACGGG CCATCAGTTC
AACGACCTGG GCCTGGCGCT CGATGCCGCG GCCGAAGACT TCGGCGTGGT GCTGATGCAC
CTGAAGCTCG GCAGCGCCTG GCTGGAGAAC GGGCGCCTCG TGCGGCTTTC GGCAGAGAGC
GTGCCCTCGC CCAATGCCTA TTTCCTGTGC TGGCGGCCGG GGGCAATGGA GCGCTGGGAG
TGCGCGACCT TCGTCGAATG GCTGCGGCAG GCGCTGCGGG ACTGA
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| Protein sequence | MASTRLPSTQ GLQAFEAVAR LRSVNIAAEE LSVTPSAVSH RIRQLETLLE LRLFTGNDFG
LSADGVAYLA RVREAIAALQ RVPGREPASQ VRRLRVAVTP TFSRQMLLPR LARFRDAYPN
IELMLQVTMP VRNMTAEEAD LELRFGTGPF HDREFCQLLA DDVAPACSPA YLQRHGPFDG
FATDAEASRV QLLRTPLESW RTWFKARGIG LPEPATGHQF NDLGLALDAA AEDFGVVLMH
LKLGSAWLEN GRLVRLSAES VPSPNAYFLC WRPGAMERWE CATFVEWLRQ ALRD
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