Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1323 |
Symbol | |
ID | 7973004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1440135 |
End bp | 1441385 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644791921 |
Product | DNA-directed DNA polymerase |
Protein accession | YP_002943240 |
Protein GI | 239814330 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.308192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCTCCC CGACCGTTCC AACGCCCCCG ATCCGCCGCA TCGCCCACCT CGACATGGAC GCCTTCTACG CGTCGGTCGA GCTGCTGCGC TATCCGCAGC TCAAGGGCCT GCCGGTGGTG ATCGGCGGCG GGCGGCGCAG CGTGGACGAG GCGATCCGCC ACGTGCCCGA GGGCGGCACG CTGGCCGACA TTCCGGTGGA GGCCTTTCCG CGGCTGAGAG ACTACGTGGG CCGCGGCGTG ATCACCACCG CCACCTACCC GGCGCGGCAG TTCGGCGTGG GCTCGGCCAT GGGGCTCATG AAGGCCGCCA AGCTGTGCCC GCAGGCCATC ATCCTGCCGG TGGACTTCGA GGAGATCCGC AAGTACTCGC GCACCTTCAA GCAGGTCATC AGGGAGGTCG CGCCGCTGAT GGAAGACCGC GGCGTGGACG AGGTCTACAT CGACTTCACC GATGTGCCCG GCGGCCAGCG TGAAGGCGGC CGATCGCTCG CGCGGCTCAT CCAGAAGGCC ATCCTCGACG CCACCGGCCT CACCTGCTCC ATCGGCGTGG CGCCCAACAA GCTCATCGCC AAGATGGCGA GCGAGTTCAA CAAGCCCAAC GGCATCTCGG TGGTCTACGA AGACGACCTG CAGACGCGCA TCTGGCCGCT GCCCTGCCGC AAGGTGAACG GCATCGGGCC CAAGGCCGAC GAGAAGCTCA AGCGCTTCGG CATCGAGACC GTGGGCCAGC TCGCGGCGCG CGAGCGCGAC TGGCTGATCC AGAACTTCGG CAAGTCCACG GGCGCATGGA TGCACGAGGT GGCCTGGGGC CGCGACAACC GGCCGGTGGT GACCGAGAGC GAGCCCGTGT CGATGAGCCG TGAGACCACC TTCGACCGCG ACCTGCATGC GGTGCGCGAC CGCGCCGAGC TGGGCGCGAT CTTCACCCAC CTGTGCGAGA AGGTGGCCGA AGACCTGCAG CGCAAGGGCT ACGTGGGCAA GACCATCGGC ATCAAGCTGC GCTACGACGA TTTCAAGATC GCCACGCGCG ACCAGACCAT CGAGCGCCAC ACCGCCGACG GCAAGACCAT CCGCCAGGTC GGCGGGCTGT GCCTGAAGCG CGTGCCGCTG GATCGGCCCC TGCGCCTCCT GGGCGTGCGC GTGGGCGCGC TTGCGAAGGC CGGCAGCCCC GAGGCCATGG CAACGGCCGC GGGCGGCCCG GCCCCGCGCG CCCCCGCAGA GGCGGCCTCG GCCACCGCGT CGCTCTTCTG A
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Protein sequence | MSSPTVPTPP IRRIAHLDMD AFYASVELLR YPQLKGLPVV IGGGRRSVDE AIRHVPEGGT LADIPVEAFP RLRDYVGRGV ITTATYPARQ FGVGSAMGLM KAAKLCPQAI ILPVDFEEIR KYSRTFKQVI REVAPLMEDR GVDEVYIDFT DVPGGQREGG RSLARLIQKA ILDATGLTCS IGVAPNKLIA KMASEFNKPN GISVVYEDDL QTRIWPLPCR KVNGIGPKAD EKLKRFGIET VGQLAARERD WLIQNFGKST GAWMHEVAWG RDNRPVVTES EPVSMSRETT FDRDLHAVRD RAELGAIFTH LCEKVAEDLQ RKGYVGKTIG IKLRYDDFKI ATRDQTIERH TADGKTIRQV GGLCLKRVPL DRPLRLLGVR VGALAKAGSP EAMATAAGGP APRAPAEAAS ATASLF
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