| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1321 |
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| Symbol | |
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| ID | 7973002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1438364 |
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| End bp | 1439434 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791919 |
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| Product | purine nucleoside permease |
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| Protein accession | YP_002943238 |
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| Protein GI | 239814328 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG5042] Purine nucleoside permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.435473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTCT TCCATCGGCC GTTCCCGTCT TCCTGCGTGC GCTGGCTCTC GGCCTGCGGC
GCGGCGCTGC TCGTTGCGGC CTGCGCTTCC CCAACTTCGC CGACCTCGCC GGTATCGGCT
GCACGCCCAG CTGCCGCAGC CGCACCCGTC AAGGTGAAGG TCTTCGTCGC GGCCATGTTC
GAGATCGGCC AGAACACCGG CGACCGGGCC GGCGAGTTCC AGCACTGGTA CGAGCGCTAC
TGGAAGGGCG CCGCGCCCAT GGCGGTGCCC GGCGCATTGC AGCCGGTGTA CTGCAATGCC
GACGGCGTGT GCGGCGCGGT GCTCGGCATG GGCAAGGTCA ACTCGTCGTC GTCGATGCAG
GCCATCCTGC TGAACCCGCA GTTCGACTTC TCGCAGGCCT ACTACGTGAT TTCCGGCGTG
GCCGGCACGC CGCCGGCGCG CGGCACCATC GGCGAAGTGA GCTGGGCCAC CTGGCTCGTG
GACTACGACC TCGGCCACCG CTGGGCGCCC GAGGAGAACA AGCCCGGCGA ACCCACCTTC
ATGCCGCGCA AGGGCTACGA GGAATACCGC CGCTTCAAGC TCAACCCCGA CCTCGTGGGC
TGGGCCATGA AGCTCTCGTC CGACACGCCG CTCAAGGATT CGGACAGCGC GCGCAAGTAC
CGCCTGCGCT ACCCCGATGC GGCCGCGCGG CGCGCGCCCT TCGTGGCCAC CGGCACCCAC
ATGACCGGCG ACACCTTCTT CCACGGTCCC GGCATGTCGA AGCAGGCGCA ATACATCGCC
AGGCTCTACG GCGCCGACGA CTACGTGATC ACCGAAATGG AAGCCGCCGC CATCACGCTC
GTGATCAAGC GCACCCATGG CACCGACCGC GTGATGAGCC TGCGCGGTGC CGTCAACTTC
GACCAGGGCA GCCCGAAGGA AAGCACGCTG CAGCACCTGG ACCCGGCCCC TGGCGAGACG
GCGGGCGGCT TTGCCGAGAC GGTGGAGAAC ATTGCGCTGG TGGGCACGCG CGTGGTGGAC
CACATCGTGG CCAACTGGCC GCAGTGGCAG GCCGGCGTGC CCAAGCCCTG A
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| Protein sequence | MMFFHRPFPS SCVRWLSACG AALLVAACAS PTSPTSPVSA ARPAAAAAPV KVKVFVAAMF
EIGQNTGDRA GEFQHWYERY WKGAAPMAVP GALQPVYCNA DGVCGAVLGM GKVNSSSSMQ
AILLNPQFDF SQAYYVISGV AGTPPARGTI GEVSWATWLV DYDLGHRWAP EENKPGEPTF
MPRKGYEEYR RFKLNPDLVG WAMKLSSDTP LKDSDSARKY RLRYPDAAAR RAPFVATGTH
MTGDTFFHGP GMSKQAQYIA RLYGADDYVI TEMEAAAITL VIKRTHGTDR VMSLRGAVNF
DQGSPKESTL QHLDPAPGET AGGFAETVEN IALVGTRVVD HIVANWPQWQ AGVPKP
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