Gene Vapar_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1319 
Symbol 
ID7973000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp1436371 
End bp1437048 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content72% 
IMG OID644791917 
Producthypothetical protein 
Protein accessionYP_002943236 
Protein GI239814326 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.195664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCCT CGCCCGGAGC CCGAAGCTGG ATCGCCGCCG GCGTACGCCA CGAACTGCTC 
ACCCGCGCCT TGCCGGCACT GCGCCACGAC ATGGCGGCCC CGGTGTCGGT GATCCGCATG 
GCGCTGCTCA TGCTCAAGCG CCAGATCGGC GCCCCGGTCA TCGATGCACC GGTCTGCGAG 
GAGCGCGTGG CGCTGATCGA CAACCAGGTG TCCGAACTCG TCGAGGGCAT CCGCTCGCTG 
CGCGACTGGG AACTGGCCAC GACGGATGAC GGCATCACGC GCAGCGCGCT GGTGGCGCAG 
TGCGTAGGCC TGATGCGCGC AGCCTTCGAC ATGCACGGCG TCGAGCTGGC TGTCGATGCC 
GCGCTCGAAC CGCGCGAGGG CGAAACGCGC TGGCCCCAGG GCGCCGCGCT GCGCTACCTG 
GTGCTTGGCG GCCTCGGATA CCTGCACGAC GGCGCATCCG AAGCCGGCGC GATCCGCATC 
GAGGCCGATG GCGGCAACGC GCTTCGCCTC AGTGCCTTGC CGCGCGAATC CGCCGGTGCC 
AGCCCGGTGC TCGACGCGCA CCGCGCCCCG CGTGCGCTGG CCATCGACGC GATTGCGCTC 
CAGAGCCTGG CGGAAGACCT GGGCTACACC GTGGCGCTCG AGCGCGACAG CGTGCGCTTT 
CCGCTCGCGC CGGGCTGA
 
Protein sequence
MKASPGARSW IAAGVRHELL TRALPALRHD MAAPVSVIRM ALLMLKRQIG APVIDAPVCE 
ERVALIDNQV SELVEGIRSL RDWELATTDD GITRSALVAQ CVGLMRAAFD MHGVELAVDA 
ALEPREGETR WPQGAALRYL VLGGLGYLHD GASEAGAIRI EADGGNALRL SALPRESAGA 
SPVLDAHRAP RALAIDAIAL QSLAEDLGYT VALERDSVRF PLAPG