| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1317 |
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| Symbol | |
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| ID | 7972998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1435447 |
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| End bp | 1435863 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644791915 |
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| Product | protein of unknown function DUF1486 |
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| Protein accession | YP_002943234 |
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| Protein GI | 239814324 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3631] Ketosteroid isomerase-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.26628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTCTG AACAGAACAA GCGCACTATC GCCGACGCAT GGAAGGCTTT CGCAAGCCGC
GACCCCCAAC GCATCGCGTC CTGGTTCACC GAGGATGCCG AATGGCTGGC GCCACGCGGC
AACGCCACCG CGCTGGCGCT CGATGCGCCC GACCACATGA TCGGTCCGGA CGCGATCGTG
CATTTCCTGG CCGAGAGATT TCCGGCGCTC TTCGTCTCCG ATGTCGCGGT CGATTTCCGA
AGCCGCTATT GCGAGGGCGA TACCGTGATC GTCGAGCTGC GCCTGCAGGC CACGCTCGCG
AACGGCCGCC GGTACGACAA CGACTACTGC TTCATCTTCG AACTGCGCGA TGGGCGCATC
GCCCGCGTGC GCGAGTACAT GGACACGCAG AAGGGCCGCG CCTGCATCTT CGGCTAG
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| Protein sequence | MNSEQNKRTI ADAWKAFASR DPQRIASWFT EDAEWLAPRG NATALALDAP DHMIGPDAIV
HFLAERFPAL FVSDVAVDFR SRYCEGDTVI VELRLQATLA NGRRYDNDYC FIFELRDGRI
ARVREYMDTQ KGRACIFG
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