| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1315 |
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| Symbol | |
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| ID | 7972996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1432953 |
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| End bp | 1433939 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791913 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943232 |
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| Protein GI | 239814322 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.39846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCGA CTCACTTCTC GCGCCGCCAT CTCATGGCCG CGATGGCAGG CAGCGCGGCG
CTGTCTGCAC TGCCGCATCG CGCCTTCGCG CAGCAGCCCC TGCCGCCACT CATCAAGCTG
GTGGTCGGCT ATTCGGCCGG CGGCCCGGTG GACGGCGCGG CGCGCCTGCT TGCGCCCGCG
CTGAGCCAGG AGCTCGGCAC GCAGGTCATC GTCGACAACC GCCCCGGTGC CAGCGGCTCG
GTGGGCGGCG ATGCAGTGGC CAAGGCCGTG CCCGACGGCG CGCTGCTGTT CTTCGGCGCA
AGCCCGACCA TCACCATCAA TCCGAACATC CAGCGCAGGA TGCCCTTCGA TCCGATGAAG
GACCTGACGC CCATCGCGCC GCTGGTCGAC TACACCAACG TGCTCGTGGT CAACAAGGAC
CTGCCGGTGC ACAGCGTGGC CGAGCTGCTG GCCTATGCGA AGGCGCGGCC GGGCAAGGTG
TTCTACGGCT CGGCCGGCAT CGGCGCGTCG AATCACCTGA GCGGCGCGCT GCTCGAGAAG
ATGACCGGCG TGCAGCTCAC GCATGTGCCG TACAAGGGCA GCGCACCCGC ATTGGCCGAC
GTGATGGGTG GCACCGTGAC CATGATGTTC GACATCATCG CCACCTCGCG GCCCTTCATC
CAGTCGGGCA AGATCCGCGC GCTGGCCGTC ACCTCGCGCC AGCGCAACCG CATGCTGCCC
GAGGTGCCGA CCATGATCGA GTCCGGCGTG GCCGGCTACG ACGTGGGCGG CTGGTTCGGT
CTCTATGGCC CCGCGCGCAT GGACGCGGCG CTGGTCGCGC GCCTGAACGC CGCCGCGCAC
AAGGCGCTGG CGCGTGAGGA TGTCGCCCAT CGGCTGCGCG AGCAGGGCTA CGAGGTCTGG
AGCGGCGGCG CGGAGCTGCT CGCGGCCAAG GGCCAGGCCG ACCGCAGGCT CTGGGCCACC
GCGGCGCAGG GCATCGAGGC GGAATGA
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| Protein sequence | MTSTHFSRRH LMAAMAGSAA LSALPHRAFA QQPLPPLIKL VVGYSAGGPV DGAARLLAPA
LSQELGTQVI VDNRPGASGS VGGDAVAKAV PDGALLFFGA SPTITINPNI QRRMPFDPMK
DLTPIAPLVD YTNVLVVNKD LPVHSVAELL AYAKARPGKV FYGSAGIGAS NHLSGALLEK
MTGVQLTHVP YKGSAPALAD VMGGTVTMMF DIIATSRPFI QSGKIRALAV TSRQRNRMLP
EVPTMIESGV AGYDVGGWFG LYGPARMDAA LVARLNAAAH KALAREDVAH RLREQGYEVW
SGGAELLAAK GQADRRLWAT AAQGIEAE
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