| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1311 |
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| Symbol | |
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| ID | 7972992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1427144 |
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| End bp | 1428508 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791909 |
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| Product | MmgE/PrpD family protein |
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| Protein accession | YP_002943228 |
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| Protein GI | 239814318 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCT CATCGAATCA TCCCAGCCGG GATCTCGCCA CCTTCGCCGC CGAACTCAAG
TTAGCGGACA TTCCCGCCCC CGTGCTGCGC CGCACCGAGG ACCTGATGCT CGACTGGCTG
GGCTCGGTGC TCGCGGCGCG CACGGCGCGG CCGGTACGCA GCATCGAGCG CTTCGCCCAG
ACGATGGGGC CGGCCGAGGG GCCGAGCGAA ATGCTCACCT CGCGCCGCAC CACTTCGCCA
GTGTTCGCCG CGCTCGTCAA CGCCGCGGCC TCGCACTACG TGGAGCAGGA CGATGTGCAC
AACGGCTCGG TGTTCCATCC CGCGGCCGTG GTCATCGCGC CCGCGCTGGC CGTGGCGCAG
AGCATCGGGG CCAGCGGTGC GCAGCTGCTG ACGGCGGTGG TGGCCGGCTA CGAGGTCGGC
ATCCGCGTCG GCGAGTTCCT CGGGCGCTCG CACTACAAGA CCTTCCACAC CACCGCGACG
GCGGGCACGC TCGCAGCGGC TGCCGCCGTG GGCCGACTGC TCGAACTCAC GCCGCAGCAG
ATGCTGCATG CCTTCGGCTC GGCCGGCACG CAGTCGGCGG GCGTGTGGGA ATTCCTGCGC
GATGCGGCCG ATTCGAAGCA GCTGCACTGC GCGCATGCGG CCGCCAGCGG ACTGATGTCG
GCCTACCTCG CGCAGGACGG CTTCACGGGC GCGGCGAAAG TGCTCGAAGG CGCGCAGGGC
CTGGGCGTGG GCATGTCGAG CGATGCCGAT CCGGCACGGC TCACCGACCG CCTCGGCACG
CGCTGGGCGC TGGCCGAAAC CTCGTTCAAG TACCACGCCT CCTGCCGCCA CACGCATCCC
GCGGCCGATG CGCTGCTGCA GGTGATGAGC GAGCACCAGC TCGCGCACGG CGACGTGGCC
CACGTGACCG CGCACGTGCA CCAGGGCGCC ATCGACGTGC TGGGCCGCGT CACGGTGCCA
GCCACCGTGC ACCAGGGCAA GTTCTCGATG GGCACGGTGC TGGGCCTGAT CGCGGTGCAC
GGCCGCGCCG GCCTGGGCGA ATTCGACCGC GACTTTCTGG CGCCCGAGGT GGCCGCGTTC
CGCGACAAGG TGGCGATGCA GCTCGACGCC GAGGTCGACA CCGCCTACCC CGCGCGCTGG
ATCGGCAAGG TCAGCGTGCA GACCCGCGAC GGCCGCACGC TGGCCGGGCG CGTCGACGAG
CCCAAGGGCG ACCCGGGCAA CAGCCTGAGC CGCACGGAAA TCGAGGACAA GATGCAGCGC
CTCGCGCACT ACGGCGAGGG CGCCACGGCC GACGAGGCGA AGGCGCTGTG CCAACGCATC
TGGCAGCTCG AGTCTGCGCC GCGCGTGGGC CGCTGGCTCG GCTGA
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| Protein sequence | MTTSSNHPSR DLATFAAELK LADIPAPVLR RTEDLMLDWL GSVLAARTAR PVRSIERFAQ
TMGPAEGPSE MLTSRRTTSP VFAALVNAAA SHYVEQDDVH NGSVFHPAAV VIAPALAVAQ
SIGASGAQLL TAVVAGYEVG IRVGEFLGRS HYKTFHTTAT AGTLAAAAAV GRLLELTPQQ
MLHAFGSAGT QSAGVWEFLR DAADSKQLHC AHAAASGLMS AYLAQDGFTG AAKVLEGAQG
LGVGMSSDAD PARLTDRLGT RWALAETSFK YHASCRHTHP AADALLQVMS EHQLAHGDVA
HVTAHVHQGA IDVLGRVTVP ATVHQGKFSM GTVLGLIAVH GRAGLGEFDR DFLAPEVAAF
RDKVAMQLDA EVDTAYPARW IGKVSVQTRD GRTLAGRVDE PKGDPGNSLS RTEIEDKMQR
LAHYGEGATA DEAKALCQRI WQLESAPRVG RWLG
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