| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1308 |
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| Symbol | |
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| ID | 7972989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1424242 |
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| End bp | 1425396 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791906 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_002943225 |
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| Protein GI | 239814315 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.577493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGATCA TCCGCGTCAG CGCCACGCCG CTGAACATTC CCGTCACCGT CGATGTGCTG
GGGCTCAACC AGCAGACCTC GCTCTCGCTC TGCCTGACCG AGATCGAGAC CGACACCGGC
CTTGTCGGCC ATGGCATGAC GGCCATCACC GAAGAAGAGA TCATCGCCGC CGCCGTGCGC
GAGGTGGCCG GCCCGGCATT GATCGGCGAA GACCCGATGG CCACCGAGCG CCTGTGGGAC
AAGCTCTACT GGCTGCTCTC GCCGCGCGGC CAGACCGGCT ATGCGAGCCA CGCCATTGCC
GCGCTCGACA TCGCGCTGTG GGATTTGAAG GCCAGGGCGC TCGGCCAGCC GCTGTGGCGC
CTGCTGGGCG GTGCGCGCTC CAGGGTGCCG GTCTATGCGA CCTTCGGCTT CGGCTTCTTC
GAGCGCGACC AGCTCGCCGC CGCCGCCAGG CTCTGGGTCT CGCAGGGCTT CCGGCGCCTG
AAGATGACGG TCGGCGGCCA TGCGCTCGCG CGGCGCGACG AGCCGCGGCC CATCGACGAG
GTCATTGCCG AGGACGTGCG CCGCGTGGCG GCCGTGCGCG AGGCGGTCGG GCCCGACGTC
AAGCTGTATG TCGATGCCAA CTGCGGCCTC GACCTGTTCC ACGCCACCGA ACTCGCGCGC
CGCATCGAGC CCTACGGCAT CAGCTTCTTC GAGGAGCCGC TCACGCAGAA CGACGTGCGG
CAGATGGCCC AGCTGCGCGC GCGCACCAGC ATTCCGCTGG CCTGCGGGCA GAACGAAGGG
TTGGCCTTCC GCTTCCGCGA CCTGCTGGTG AACCAGGCGG CCGACGTGCT GCAGCCCAAC
GTGACCATCT CGGGCGGCTA TTCGCAGTGC CTCAAGATCG CGGGCATGGC CGCGGCCTTC
AACGTGCCGA TCGACAACGG CGGCGCCTGG CCCTTCCACA ACATGCACCT GCATGCAGGC
GTGTCGAACG GCGGCATGGC CGAATACCAC TACGTGGCCG TGCAGATGCT CAAGCAGGTC
TTCGACGGCC TGCCGGTGCC GCAGGACGGC TGGCTGCAGC TGCCCGAGTC ACCGGGCCTG
GGCTTCGCGC CCAATGCGGA CCGCGTGCGC GAGCTCGCGA AGCTCCCGAC TTCGCGCGGC
AAGGGCAAAG CCTGA
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| Protein sequence | MKIIRVSATP LNIPVTVDVL GLNQQTSLSL CLTEIETDTG LVGHGMTAIT EEEIIAAAVR
EVAGPALIGE DPMATERLWD KLYWLLSPRG QTGYASHAIA ALDIALWDLK ARALGQPLWR
LLGGARSRVP VYATFGFGFF ERDQLAAAAR LWVSQGFRRL KMTVGGHALA RRDEPRPIDE
VIAEDVRRVA AVREAVGPDV KLYVDANCGL DLFHATELAR RIEPYGISFF EEPLTQNDVR
QMAQLRARTS IPLACGQNEG LAFRFRDLLV NQAADVLQPN VTISGGYSQC LKIAGMAAAF
NVPIDNGGAW PFHNMHLHAG VSNGGMAEYH YVAVQMLKQV FDGLPVPQDG WLQLPESPGL
GFAPNADRVR ELAKLPTSRG KGKA
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