| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1303 |
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| Symbol | |
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| ID | 7972984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1419441 |
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| End bp | 1420340 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791901 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002943220 |
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| Protein GI | 239814310 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.427571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGC TGGCCAACGG ATTGCAGATC GAGGTCGACG ACACCGGCGG CGAAGGCCGC
CCGGTGGCCC TGCTCATCAT GGGCCTGGGC ATGCAGCTGG TCGGCTGGCC GCAGGACTTC
GTGCAGGCGC TGGTCGATGC GGGCTTTCGC GTGGTGCGCC ACGACAACCG CGACATCGGC
CTGAGCCAGG GCTTCGACCA TGCGGGCACC GGCAACATCG TGTGGGAGAG CATTCGACAG
AAGCTGGGCC TGCAGGTGCG ATCGGCCTAC ACCTTGCAGG ACATGGCGCG CGATTCGCTG
GGCGTGCTCG ACGCATTGGG CATCAAGCAG GCGCATGTCA TCGGCGCCTC GATGGGCGGC
ATGATCGCGC AGCACCTGGC CGCCGAAGCG CCCGAGCGCG TGGCCAGCCT CGTGAGCATC
ATGAGCTCCA GCGGCGCGCG CGGCCTGCCC GGACCGCGCA GCGACGTGGC CGCCATGCTG
CTGCGCCGGC CGCTGGGCGG CGGCGAGGCC GAGCTGGTGG CGCACAGCAT CCGGCTGCTC
AGGCTCATCC AGAGCCCCGC CTATCCGCAA AGCACCGAGG CGCTGGCAGA GCGCCTCACC
TTCAGCATGC GCCGCGCCTA TCGCCCGGCC GGCATGTTCC GCCAGATGCT CGCCATTGGC
GCCGATGCGC GCCGCCCCGA AGTGCTGCCG CGCATCAAGT GCCCGACGCT GGTGCTGCAC
GGCGAAGCCG ATGCGCTGGT GCCGATGGCC TGCGGCCTGG ACACCGCCAA GCGCATTCCG
GGCGCAAAGT TCGTCAGCAT TCCCGGCATG GGCCACGACC TGCCGCCCGA GGTCTGCGCG
ATCCTCGCCA ATCACATTGC GCCGTTCCTG CATGCGGCCG AAGAACACCA CAAGCCATGA
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| Protein sequence | MKLLANGLQI EVDDTGGEGR PVALLIMGLG MQLVGWPQDF VQALVDAGFR VVRHDNRDIG
LSQGFDHAGT GNIVWESIRQ KLGLQVRSAY TLQDMARDSL GVLDALGIKQ AHVIGASMGG
MIAQHLAAEA PERVASLVSI MSSSGARGLP GPRSDVAAML LRRPLGGGEA ELVAHSIRLL
RLIQSPAYPQ STEALAERLT FSMRRAYRPA GMFRQMLAIG ADARRPEVLP RIKCPTLVLH
GEADALVPMA CGLDTAKRIP GAKFVSIPGM GHDLPPEVCA ILANHIAPFL HAAEEHHKP
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