| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1302 |
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| Symbol | |
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| ID | 7972983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1418584 |
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| End bp | 1419423 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791900 |
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| Product | Procollagen-proline dioxygenase |
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| Protein accession | YP_002943219 |
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| Protein GI | 239814309 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.940655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAC CGATCAGTCC GGAGCTCCGG GAATGGCTGG TGTCGCAGCT CGCGGCGGGG
CATTCGGTGC CTGCGCTGCG GGCCTCGATG CGCGCGGCCG GCTGGCAGGA CGCGGCCACC
GACCTGGCGC TGGCGCAGCT CGAGGCCGGC TTTCCCCACG TGGAAGTGGC CCGGCCGCGG
CGCACCGAAA TGCCCGGCCC CGATCTCGAA GGCGCGCCGC TGTACATCGA CGCGGGCGAC
CGCCGCGTGC AGGTGCTGCA GACCATGCGG CATCCGCGCG TCGTCGTGTT CGGCAATCTG
GTATCGCCCG AGGAGTGCGA AGGGCTGATT GCCGCGGCGC GGGTGCGGCT GGCGCGCTCG
CTCACGGTCG AGACGCGCAC CGGCGGCGAG GTGCTCAACG TCGACCGCAC CAGCGAGGGC
ATGTTCTTCG AGCGCGGCGA GAACGACATC GTCGCGCGCC TCGAGCAGCG CATTGCCGCG
CTGCTGCGCT GGCCGGTGGA GTTTGGCGAA GGCCTGCAGA TCCTGCGCTA TGCGCCCGGC
GCCCAGTACC GCCCGCACTA CGACTACTTC GACCCCGGCG AGCCCGGCAC GCCCACCATC
CTCAAGCGCG GCGGCCAGCG CGTGGCCACG CTCGTGATGT ACCTGCAGGA GCCCGGGCAG
GGCGGCGCCA CCACCTTCCC CGACGTGGGC CTGGAAGTGG CGCCCGTGCG CGGCACCGGC
GTGTTCTTCA GCTACGAGGA ACCCGACCCC GCCACCCGCA CGCTGCATGG CGGCGCGCCC
GTGCTCGCGG GCGAGAAGTG GGTCGCCACC AAGTGGCTGC GCGAGCGCGA GTTCAAATAA
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| Protein sequence | MSQPISPELR EWLVSQLAAG HSVPALRASM RAAGWQDAAT DLALAQLEAG FPHVEVARPR
RTEMPGPDLE GAPLYIDAGD RRVQVLQTMR HPRVVVFGNL VSPEECEGLI AAARVRLARS
LTVETRTGGE VLNVDRTSEG MFFERGENDI VARLEQRIAA LLRWPVEFGE GLQILRYAPG
AQYRPHYDYF DPGEPGTPTI LKRGGQRVAT LVMYLQEPGQ GGATTFPDVG LEVAPVRGTG
VFFSYEEPDP ATRTLHGGAP VLAGEKWVAT KWLREREFK
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