| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1301 |
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| Symbol | |
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| ID | 7972982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1417642 |
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| End bp | 1418427 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791899 |
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| Product | protein of unknown function DUF328 |
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| Protein accession | YP_002943218 |
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| Protein GI | 239814308 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.395168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTTCC TGCTCTCCCC TGCGAAATCG CTCGACTACG ACACCCCCGT TCCCACCGAA
GTCCCCGCCA CCCAACCCCA TTTCGAAGCC CCCCGCGGCC CCTCGGCCGA ACTGATCAAG
CTGCTGCGCG AGAAGTCGCC GCAGCAGATC TCCGAACTCA TGCACCTGTC GGAGAAGCTC
TCCGCACTGA ACGTGGCGCG CTACCAGGCC TGGTCCGGCA AGGGCACGCC GAAGAATGCG
CGCCAGGCCG CCTTCGCGTT CGATGGCGAC GTCTACGGCG GGCTCGATGC GCGCTCGCTC
ACGCCCACGC AGCTGGCCTG GGCGCAGGAG CACGTTTGCA TCCTGAGCGG CCTCTACGGC
CTCTTGCGCC CGCTCGACCT GCTGCAGCCC TACCGGCTGG AGATGGGCAC GCCGCTTGCC
AATCGGCACG GCAAGGACCT GTATGCCTTC TGGGGCGCGC GCATTGCGGA GCACCTGAAC
CAGCGCCTGG CGGCGGACCG CACCCCCGTG GTGGTCAATG TGGCCTCGCA GGAATACTTC
AGGTCGGTGG ACCGGAAGGC GCTCAAGGCG CGCGTGGTCG AATGCGTGTT CGAGGAGTGG
AAGGGTGACC GCTACAAGAT CGTGAGCTTC TACGCCAAGC GGGCCCGCGG CCTGCTCGCG
CGCTGGGCGG TGCTGCACAA GGCCGCCACG CCCAAGGCGC TGGAAAAATT CGATCTCGAG
GGTTATGGTT TCGATGCCAC GGCGTCGACG GCCGAAAGGC TGGTGTTCAG AAGGAAATTT
GGATGA
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| Protein sequence | MLFLLSPAKS LDYDTPVPTE VPATQPHFEA PRGPSAELIK LLREKSPQQI SELMHLSEKL
SALNVARYQA WSGKGTPKNA RQAAFAFDGD VYGGLDARSL TPTQLAWAQE HVCILSGLYG
LLRPLDLLQP YRLEMGTPLA NRHGKDLYAF WGARIAEHLN QRLAADRTPV VVNVASQEYF
RSVDRKALKA RVVECVFEEW KGDRYKIVSF YAKRARGLLA RWAVLHKAAT PKALEKFDLE
GYGFDATAST AERLVFRRKF G
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