| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1296 |
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| Symbol | |
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| ID | 7973221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1411908 |
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| End bp | 1412810 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791894 |
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| Product | cysteine synthase B |
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| Protein accession | YP_002943213 |
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| Protein GI | 239814303 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTATC CGACGATCGA AGACGCCATC GGCAAGACTC CCCTGGTGGC ACTGCAACGC
ATCGATGCGG CTGAGAACGC CAGGCGCGGC AATGTCATCC TCGGCAAGCT GGAAGGCAAC
AATCCCGCGG GCTCGGTGAA GGATCGTCCT GCGCTCTCGA TGATCAAGCG CGCCGAGGAG
CGCGGCGAGA TCAAGCCCGG CGACACGCTG ATCGAAGCCA CCTCGGGCAA TACCGGCATC
GCGCTGGCCA TGGCCGCGGC CATCAAGGGC TACCGCATGG TGCTGATCAT GCCGGAGGAC
CTGTCCGTCG AGCGCGCCCA GACCATGAAG GCCTTCGGCG CCGAGCTGGT GCTCACGCCC
AAGAGCGGCG GCATGGAATA CGCGCGCGAC CTGGCCGAGC AGATGGTGGC GCAGGGCAAG
GGCCGGGTGC TCGACCAGTT CGCCAACGCC GACAACCCGC GCATCCACTA CGAGACCACC
GGCCCCGAGA TCTGGGCCGA CACCAAGGGC AAGATCACGC ATTTCGTGAG CGCCATGGGC
ACCACCGGCA CCATCACCGG CGTCTCGCGC TTCCTGAAGG AAAAGAACCC CGCGGTGCGC
ATCATCGGCG CGCAGCCGGC CGAAGGCTCG CGCATCCCGG GCATCCGCAA GTGGCCGGCC
GAATACCTGC CCAAGATCTA CGACCCGAGC CGGGTCGACG AAGAAATCAG CGTGAGCCAG
GACAACGCCG AGGAGATGTG CCGGCGCCTT GCGCGCGAGG AGGGCATCTT CGGCGGCATC
TCCGCGGCCG GCGCGCTCTG GGTGGCGCTC GAGGTTGCCA AGACGGTCGA GAACGCGACC
ATCGTGTTCG TGGTGTGCGA CCGCGGCGAC CGGTACCTGT CGACCGGCGT CTTTCCCGCC
TGA
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| Protein sequence | MNYPTIEDAI GKTPLVALQR IDAAENARRG NVILGKLEGN NPAGSVKDRP ALSMIKRAEE
RGEIKPGDTL IEATSGNTGI ALAMAAAIKG YRMVLIMPED LSVERAQTMK AFGAELVLTP
KSGGMEYARD LAEQMVAQGK GRVLDQFANA DNPRIHYETT GPEIWADTKG KITHFVSAMG
TTGTITGVSR FLKEKNPAVR IIGAQPAEGS RIPGIRKWPA EYLPKIYDPS RVDEEISVSQ
DNAEEMCRRL AREEGIFGGI SAAGALWVAL EVAKTVENAT IVFVVCDRGD RYLSTGVFPA
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