| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1294 |
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| Symbol | |
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| ID | 7973218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1410181 |
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| End bp | 1411122 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644791891 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002943211 |
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| Protein GI | 239814301 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTTCAA TCAATAGCCC TTCCGGCGCG CTGCCGGCGC GCTTTCGCCG CGAACGCCTG
CTGATCGTGG GCTGCGGGGA CGTCGGCCAG CGCGTGGCGC GCAGCCTGCG CGGCCGCATG
CAGCTGGTGG CGCTCACTTC ATCGGGCGAA CGGGTGCCGG CCCTGCGGGC GGCGGGCATC
CGTCCGCTCC AGGGCAACCT GGACGATCCG GCCACGCTGC GCCGCCTGGC TGGCGTGGCC
ACCCGCGTGC TGCACGTGGC GCCACCGGCG CGCGACGGCG GCGCCGCCTG GTGGCGCGAC
CAGCGCACCA CGGCGCTGGC GCGCGCGCTG CGGCTGCGTT CCGTGCCGCT GGCGTTCGTC
TACGGCTCCA CCAGCGGCGT CTATGGCGAC TGCGGGGGCG CCCGCGTGAG CGAAACGCGC
CCCGTGCGGC CCGACACGCC CCGCGCCCAC CGCCGCGTGG ACGCCGAGCG CGCGGTGCGC
TGGCTCGGCC GCAGCGCGGG TGTGCGCGCC AGCATCCTGC GCATCCCGGG CATCTATGCG
CCCGACCGTG AGGGCGGCAC GCCGCGCCAG CGGCTCGCGC GCGGCACACC GGTGCTGCGG
CGCGAGGACG ACGTGTTCAC CAGCCACATC CATGCCGACG ATCTTGCGCG GGCCTGCGTG
GCGGCGCTGT TCCGCGGCCG GCCGCAGCGC ATCGTGCATG CCTCGGACGA CACCGAGCTG
CGCATGGGCG ACTACATCGA CCTGGCGGCC GACCTGTACG GCATGCCGCG CCCGCCGCGC
GTGGCCCGCG AGGAAGCCCA GCGCCAACTG CCCTTGCAGC TGCTGAGCTT CATGGGCGAA
TCGCGCCGGC TCGACAACAC GCGGCTCAAG CGCGAACTGC GCGTGCGGCT CGCGCACCCG
ACGGTGCACA CCGGCCTGCG CGAAGAAGCA GCAGCAGCCT GA
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| Protein sequence | MPSINSPSGA LPARFRRERL LIVGCGDVGQ RVARSLRGRM QLVALTSSGE RVPALRAAGI
RPLQGNLDDP ATLRRLAGVA TRVLHVAPPA RDGGAAWWRD QRTTALARAL RLRSVPLAFV
YGSTSGVYGD CGGARVSETR PVRPDTPRAH RRVDAERAVR WLGRSAGVRA SILRIPGIYA
PDREGGTPRQ RLARGTPVLR REDDVFTSHI HADDLARACV AALFRGRPQR IVHASDDTEL
RMGDYIDLAA DLYGMPRPPR VAREEAQRQL PLQLLSFMGE SRRLDNTRLK RELRVRLAHP
TVHTGLREEA AAA
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