| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1291 |
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| Symbol | |
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| ID | 7973215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1407241 |
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| End bp | 1408035 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791888 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943208 |
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| Protein GI | 239814298 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAGCG CAGAAGAAAC AACAACGACG GCAACGGCAA CGGCAACTGC AACCCCGCGC
AAGACCGCGG CCAACGCCCC TGGCAAGACG CTGCTCAAGG TCAGCGGCCT CAAGGTCGGC
TACGGCGGCA TCCAGGCGGT GAAGGGCGTG GACTTCGAGG TCCACGAAGG CGAACTGGTG
TCGCTGATCG GCTCCAACGG TGCCGGCAAG ACCACCACCA TGAAGGCGAT CACCGGCACA
TTGCCGGCGG GTGCCGGCAC CATCGAATTC CTGGGCCGCA ACATCAAGGG GCGCGGCGCC
TGGGACCTGG TGGGCGAGGG CCTCGTGATG GTGCCCGAAG GCCGCGGCGT GTTCACGCGC
ATGACGATCA CCGAGAACCT GCAGATCGGT GCCTACATCC GCAAGGACAA GGCCGAGATC
GCGAGCGACA TGGAGCGCGT GTTCGTGACC TTCCCGCGGC TGCGCGAGCG CAAGGACCAG
CTCGCGGGCA CCATGTCGGG CGGCGAACAG CAGATGCTGG CCATGGGCCG CGCACTCATG
GCGCGCCCCA AGGTGCTGCT GCTCGACGAG CCCACCATGG GCCTGTCGCC GATCATGTGC
GACAAGATCT TCGAGGTGGT GCAGACCGTG GCCGCGCAAG GCGTGACCAT CCTGCTGGTG
GAGCAGAACG CCAACCGCGC GCTGCAGCTG GCCGACCGCG GCTATGTGAT GGAGTCGGGC
CTCATCACGA TGACGGGCGA CGCCAAGGAT CTGCTGAGCG ACCCGCGCGT GCGGGCCGCC
TACCTCGGCG AATAA
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| Protein sequence | MTSAEETTTT ATATATATPR KTAANAPGKT LLKVSGLKVG YGGIQAVKGV DFEVHEGELV
SLIGSNGAGK TTTMKAITGT LPAGAGTIEF LGRNIKGRGA WDLVGEGLVM VPEGRGVFTR
MTITENLQIG AYIRKDKAEI ASDMERVFVT FPRLRERKDQ LAGTMSGGEQ QMLAMGRALM
ARPKVLLLDE PTMGLSPIMC DKIFEVVQTV AAQGVTILLV EQNANRALQL ADRGYVMESG
LITMTGDAKD LLSDPRVRAA YLGE
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