| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1290 |
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| Symbol | |
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| ID | 7973214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1406451 |
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| End bp | 1407224 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791887 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943207 |
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| Protein GI | 239814297 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAG ACACCATCCT CGACGTCCGC GGCATCTCCA AGCGCTTCGG CGGCCTGCAG
GCGCTTTCCG ACGTCGGCAT CACCATCAAG CGCGGCCAGG TCTACGGCCT CATCGGCCCC
AACGGCGCCG GCAAGACCAC CTTCTTCAAC GTGATCACCG GGCTCTACAC GCCCGACAGC
GGCAGCTTCG AGCTGGCCGG CAAGCCCTAC CAGCCCACGG CCGTGCACGA AGTGGCCAAG
GCCGGCATTG CGCGCACATT CCAGAACATC CGCCTGTTCT CCGAAATGAC GGCCCTCGAG
AACGTCATGG TGGGGCGGCA CATCCGCACG CATTCGGGCG TGTTCGGCGC GATGCTGCGC
ACCGGCAGCT TCAAGGCCGA GGAAAAAGCC ATCGCCGACC GCGCGCACGA GCTGCTCGAG
TACGTGGGCA TCGGCAAGTT CGCCGACTAC AAGGCGCGCA CGCTGTCGTA CGGCGACCAG
CGCCGGCTCG AGATTGCGCG CGCACTGGCC ACCGACCCGC AGCTCATCGC GCTCGACGAG
CCCGCCGCCG GCATGAACTC GACCGAGAAG GTGCTGCTGC GCGAGCTGAT CGACCGCATC
CGCAAGGACG ACCGCACCAT TCTCATCATC GAACACGACG TCAAGCTCAT CATGGGCCTG
TGCGACCGCG TCACCGTGCT CGACTACGGC AAGCAGATTG CCGAAGGCAC GCCCTACGAC
GTGCAGAAGA ACGAAAAGGT GATCGAGGCC TATCTCGGCA CCGGAGGACA CTGA
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| Protein sequence | MTTDTILDVR GISKRFGGLQ ALSDVGITIK RGQVYGLIGP NGAGKTTFFN VITGLYTPDS
GSFELAGKPY QPTAVHEVAK AGIARTFQNI RLFSEMTALE NVMVGRHIRT HSGVFGAMLR
TGSFKAEEKA IADRAHELLE YVGIGKFADY KARTLSYGDQ RRLEIARALA TDPQLIALDE
PAAGMNSTEK VLLRELIDRI RKDDRTILII EHDVKLIMGL CDRVTVLDYG KQIAEGTPYD
VQKNEKVIEA YLGTGGH
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