| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1283 |
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| Symbol | |
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| ID | 7973207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1397640 |
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| End bp | 1398599 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791880 |
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| Product | thioredoxin reductase |
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| Protein accession | YP_002943200 |
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| Protein GI | 239814290 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.23421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCTC CCCAACACGC CAAGGTCTTG ATTCTGGGCT CCGGCCCGGC CGGCTACACC
GCCGCCGTCT ACGCAGCCCG CGCAAACCTC CAGCCGCTGC TCATCACGGG CATTGCCCAG
GGCGGCCAAT TGATGACGAC CACCGAGGTC GACAACTGGC CCGCGGACGT GCACGGCGTG
CAGGGCCCCG AGCTCATGCA GCGCTTTCTC GAGCACGCAG AACGCTTCAA GACGCAGATC
GTCTTCGACC ACATCAACAA GGTCGACCTC GGCAAGCGGC CGTTCACGCT CACCGGCGAC
AGCGGCACCT ACACCTGCGA TTCGCTGATC ATTGCCACGG GTGCTTCCGC CAAGTACCTG
GGGATCGACT CGGAACAGAA ATTCATGGGC CGCGGCGTCT CGGCCTGCGC CACCTGTGAC
GGCTTCTTCT ACCGCGAGCA GGAAGTGTGC GTGATCGGCG GCGGCAACAC CGCCGTCGAG
GAAGCCCTGT ACCTGGCCAA CATCGCGAAC AAGGTCACGC TGGTGCACCG CCGCGACAAG
TTCCGCGCCG AGCCCATCCT GATCGACAAG CTCATGGAGA AGGTCGCCGA GGGCAAGATC
GTCCTGAAGC TGCACAACGA ACTCGACCAG GTGCTGGGCG ACGACACGGG CGTGACGGGC
ATCCGCATCA AGAACACGCA AAGCGGCGCC ACCGAGCAGA TCGACCTCAA GGGCTGCTTC
ATCGCGATCG GCCACCACCC CAACACCGAC ATCTTCCAGG GCCAGCTGGA AATGAAGGAC
AACTACATCC TGACCCGCTC GGGCCTGCAG GGCTTTGCCA CGATGACCAG CATTCCGGGC
GTCTTTGCCG CCGGCGACGT GCAGGACAAC GTGTACCGCC AAGCCATCAC GAGCGCCGGC
ACCGGCTGCA TGGCCGCGCT GGACGCCCAG CGCTTCCTCG AGCAGGACGG CACGCTTTAA
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| Protein sequence | MSAPQHAKVL ILGSGPAGYT AAVYAARANL QPLLITGIAQ GGQLMTTTEV DNWPADVHGV
QGPELMQRFL EHAERFKTQI VFDHINKVDL GKRPFTLTGD SGTYTCDSLI IATGASAKYL
GIDSEQKFMG RGVSACATCD GFFYREQEVC VIGGGNTAVE EALYLANIAN KVTLVHRRDK
FRAEPILIDK LMEKVAEGKI VLKLHNELDQ VLGDDTGVTG IRIKNTQSGA TEQIDLKGCF
IAIGHHPNTD IFQGQLEMKD NYILTRSGLQ GFATMTSIPG VFAAGDVQDN VYRQAITSAG
TGCMAALDAQ RFLEQDGTL
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