Gene Vapar_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1282 
SymbolrpmB 
ID7973206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1397228 
End bp1397461 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content61% 
IMG OID644791879 
Product50S ribosomal protein L28 
Protein accessionYP_002943199 
Protein GI239814289 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0227] Ribosomal protein L28 
TIGRFAM ID[TIGR00009] ribosomal protein L28 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.397873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGCG TATGCGACGT AACGGGCAAA GGCCCGATGG TCGGAAACAA CGTTTCCCAC 
GCCAACAACA AAACCAAGCG CCGGTTCCTG CCGAACCTGC AATACCGCCG TTTCTGGGTC
GAGACTGAAA ACCGCTGGGT TCGCCTGCGT GTTTCGAGCG CCGCACTGCG CCTGATCGAC
AAGAACGGCA TCGACGCCGT GCTCGCAGAC CTGCGTGCAC GCGGCCAAGC TTAA
 
Protein sequence
MARVCDVTGK GPMVGNNVSH ANNKTKRRFL PNLQYRRFWV ETENRWVRLR VSSAALRLID 
KNGIDAVLAD LRARGQA