Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1282 |
Symbol | rpmB |
ID | 7973206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1397228 |
End bp | 1397461 |
Gene Length | 234 bp |
Protein Length | 77 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644791879 |
Product | 50S ribosomal protein L28 |
Protein accession | YP_002943199 |
Protein GI | 239814289 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0227] Ribosomal protein L28 |
TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.397873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGCG TATGCGACGT AACGGGCAAA GGCCCGATGG TCGGAAACAA CGTTTCCCAC GCCAACAACA AAACCAAGCG CCGGTTCCTG CCGAACCTGC AATACCGCCG TTTCTGGGTC GAGACTGAAA ACCGCTGGGT TCGCCTGCGT GTTTCGAGCG CCGCACTGCG CCTGATCGAC AAGAACGGCA TCGACGCCGT GCTCGCAGAC CTGCGTGCAC GCGGCCAAGC TTAA
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Protein sequence | MARVCDVTGK GPMVGNNVSH ANNKTKRRFL PNLQYRRFWV ETENRWVRLR VSSAALRLID KNGIDAVLAD LRARGQA
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