Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1281 |
Symbol | |
ID | 7973205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1397043 |
End bp | 1397216 |
Gene Length | 174 bp |
Protein Length | 57 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644791878 |
Product | ribosomal protein L33 |
Protein accession | YP_002943198 |
Protein GI | 239814288 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0267] Ribosomal protein L33 |
TIGRFAM ID | [TIGR01023] ribosomal protein L33, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.39142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACGA GCAAAGGCGG ACGCGAAAAG ATCAAGCTGG AATCCACCGC GGGTACCGGC CACTTCTACA CGACCAGCAA GAACAAGAAG ACGATGCCTG AAAAGATGTC GATCATGAAG TTCGACCCCA AGGCACGCAA GCACGTCGAA TACAAGGAAA TCAAGCTGAA GTAA
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Protein sequence | MATSKGGREK IKLESTAGTG HFYTTSKNKK TMPEKMSIMK FDPKARKHVE YKEIKLK
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