| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1280 |
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| Symbol | |
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| ID | 7973204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1395674 |
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| End bp | 1396888 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791877 |
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| Product | fatty acid desaturase |
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| Protein accession | YP_002943197 |
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| Protein GI | 239814287 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1398] Fatty-acid desaturase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.518617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATTC CTGACTCTGC CGTTTTGAGC GCGGCCATCG ACTGGCTCGG ACACGGCTTG
TGGGACCTCA CATGGTGGCA AGTCGTGCTG TACACGCTCG TCACCACGCA CATCACGATC
GCTGCGGTCA CGATCTTCCT GCACCGCACG CAGACGCACC GGGCCATGGA TCTGGGCCCG
ATCCCCTCGC ATTTCTTCCG CTTCTGGCTG TGGCTCGGCA CCGGCATGGT GACCAAGGAA
TGGGTGGCCA TCCACCGCAA GCACCACGCC AAGTGCGAAA CCGAAGAAGA CCCGCACAGC
CCGCAGGTCA AGGGCATCGA CGAAGTCCTG TGGCGCGGCG CCGAGCTGTA TCGTGCCGAG
TCGAAGAACA AGGAAACGAT GGAGCGCTAC GGCCACGGCA CGCCCGACGA CTGGCTCGAG
CGCAACCTGT ACACCCGCTA CAGCTGGCAG GGCGTGGGCC TCATGCTGGT CATCAACCTG
GCGCTGTTCG GCGCGCTCGG CCTCACGGTC TGGGCCGTGC AGATGCTGTG GATCCCGATC
ACCGCGGCCG GCATCATCAA CGGCATCGGC CACTACTGGG GCTACCGCAA CTTCGAGGCG
CCGGACGCCA GCCGCAATGT CTCGCCCTGG GGCCTGATCA TCGGTGGCGA AGAGCTGCAC
AACAACCACC ACACGTATCC CACCTCGGCC AAGTTCTCGG TCAAGAAGTA CGAATTCGAC
ATCGGCTGGG TCTACATCCA GATGATGCAG AAGATCGGCT GGGCCAAGGT CAAGAAGGTG
CCGCCGAAGA TGCTGATGGG CGACATCCAG CCCGTGGCCA ACGAGAAGAC GCTCGAGGCC
GTCATTGCCA ACCGCTATGA AGTCATGGCC GGCTATGCCC GCGAGATGCG CCGCGTCACC
AAGGCCGAAC TGGCTGCGCT CAAGACCAAG GGCGGCGACA TTTCGGTGCT CAAGGCGGCC
AAGAACTGGC TGCATCGCGA CGACGACAAG GTGCCCGCAT CGGCCCGCTC GCACCTCGTG
CAGGCGCGCG CTGCCCACCC GGTGATCGAC AAGATGGTCA CCATGCGCGA AGAGCTGCGC
CAGCTCTGGC TCAACACCTC GCAGTCGCGC GAGCAGTTGG CGGCCGACCT GGCGGCCTGG
TGCCACCGCG CGGAGGCCAG CGGCATCGCC GGCCTGCGCG AGTTCTCGAC CCGCTTGCGC
GCTGCACGCG CCTGA
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| Protein sequence | MLIPDSAVLS AAIDWLGHGL WDLTWWQVVL YTLVTTHITI AAVTIFLHRT QTHRAMDLGP
IPSHFFRFWL WLGTGMVTKE WVAIHRKHHA KCETEEDPHS PQVKGIDEVL WRGAELYRAE
SKNKETMERY GHGTPDDWLE RNLYTRYSWQ GVGLMLVINL ALFGALGLTV WAVQMLWIPI
TAAGIINGIG HYWGYRNFEA PDASRNVSPW GLIIGGEELH NNHHTYPTSA KFSVKKYEFD
IGWVYIQMMQ KIGWAKVKKV PPKMLMGDIQ PVANEKTLEA VIANRYEVMA GYAREMRRVT
KAELAALKTK GGDISVLKAA KNWLHRDDDK VPASARSHLV QARAAHPVID KMVTMREELR
QLWLNTSQSR EQLAADLAAW CHRAEASGIA GLREFSTRLR AARA
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