| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1277 |
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| Symbol | |
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| ID | 7973201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1392106 |
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| End bp | 1392342 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791874 |
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| Product | protein of unknown function DUF1653 |
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| Protein accession | YP_002943194 |
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| Protein GI | 239814284 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4728] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.195664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGACG ACAACGACCT GCCACCCCTG ATCGAGACGC CCCCCGGCCG CTATCGGCAC
TACAAGGGCG GCGAATACGA GGTGCTGGGC ACCGTGCGCC ACAGCGAAAC GCTGGAGCCG
ATGACGCTGT ACCGCGCGCT CTATGGCGCG AAAGGGCTGT GGGTCCGCCC GGCTGCGATG
TTCGAGGGCA CGGTGGAGAT CGACGGCGTC ATCCAACCGC GCTTCGCGCC GATCTAG
|
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| Protein sequence | MNDDNDLPPL IETPPGRYRH YKGGEYEVLG TVRHSETLEP MTLYRALYGA KGLWVRPAAM
FEGTVEIDGV IQPRFAPI
|
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