| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1272 |
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| Symbol | |
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| ID | 7973196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1387217 |
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| End bp | 1388569 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791869 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943189 |
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| Protein GI | 239814279 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.136166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCAC GCCGCACCCT GCTGGCCCTC GGCCTCGCAT CGACCGCCAT GCTGACCGCC
TGCGCCACCG TCCCCTCGCC TTCGTACACC GAACGCCCGC CGATCGTCTT CATGCACGGC
AATGGCGATT CGGCCGCGCT CTGGCAAACC ACGATCTGGC GCTTCGAGTC GAACGGTTGG
CCGCGCGACC GGCTCTTTGC GCTCGACCAG CCCTACCCGC TGGCACGCGA CGACGATGCC
GTGGCCCAGC CGGGCCGCAG CTCGACTGCC GATTCGGCCC TCTTCCTGAA GGCCGAGGTC
GACAAGGTGC TGAAGGCCAC GGGCGCCGCC AAGGTGGTGC TGATCGGCAA TTCGCGCGGC
GGCAACACGA TCCGCAACTA CGTGCAGAAC GGCGGCGGCG CGGCCGTCGT GAGCCACGTG
GTGCTGGGCG GCAATCCGGC GCACGGCATC TGGGCCGTGA AGGGCTTCCG CGAGAACAAC
GAGTTCTCGG GGCTCTCGGG CTTCATGCAG CAGCTCAACG CACCGAAGGG GTCGAACGGC
GACGAGGTCA CGCCGGGCGT GAAGTGGCTC ACCTTGCGCT CGGACAACAA CGACAAGTAC
GCCCAGCCCG ACGGCGTGTG GATCGGGGTG CCGGGCCAGC CGACGAACAT CGGCTTCGAC
GGACCGGCGC TCAAGGGCGC GACCAACGTG GTGCTGCCGC GCGTGGACCA CCGGGAAACC
TCGTTCTCGC CCGCGGCATT CGCGGCGACC TGGCAGTTCC TGACCGGCGA AGCGCCGCGC
AGCACGGCGG TGGCGCCGGA GGCGAAGGTC GTGCTCGATG GCCGCGCGGT GGGCGCGGAG
AACCTTGCGC TCAATGGCGG GCAGGTCACC GTGTACGCCG TCGATCCGGC CACGGGCGCG
CGGCGCGGCG ATGCGGTGCA CAGCAAGAGC ATCGGTGCCG ATGGCCGCTG GGGCCCGTTC
GATGCGCGCG GCGACACGGC CTACGAGTTC GTGCTCAGCG CACCCGGCTA CGGCATCACG
CACATCTACC GCAGTCCGTT TCCGCGCAGC AGCCGCGTCG TGAACCTGCG GCCCGAACGC
CTCACGCCGG CCGATGGCAG CGCCCAGGCG GTGGTCGTCT TCACACGGCC GCGCGGCTAC
TTCGATGCAG AGCGCGACAC CATGCGCTTC GACGGCCAGA GCCCGCCGCC CGGCGTGCCG
CCCAAGGGCT CCGGCGTGTC GAGTTCGCGT TTGCGGGTGG CCGCCGCGCA ACCGCAGCGC
GCGGTGACCG GCGAATTCAA CGCGGAGCGC ATCACCGGCC TGACCTGGCC GGCGGCGCAG
CAGCACGTGA CGGTGCTCGA ATTGACCTAC TGA
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| Protein sequence | MPSRRTLLAL GLASTAMLTA CATVPSPSYT ERPPIVFMHG NGDSAALWQT TIWRFESNGW
PRDRLFALDQ PYPLARDDDA VAQPGRSSTA DSALFLKAEV DKVLKATGAA KVVLIGNSRG
GNTIRNYVQN GGGAAVVSHV VLGGNPAHGI WAVKGFRENN EFSGLSGFMQ QLNAPKGSNG
DEVTPGVKWL TLRSDNNDKY AQPDGVWIGV PGQPTNIGFD GPALKGATNV VLPRVDHRET
SFSPAAFAAT WQFLTGEAPR STAVAPEAKV VLDGRAVGAE NLALNGGQVT VYAVDPATGA
RRGDAVHSKS IGADGRWGPF DARGDTAYEF VLSAPGYGIT HIYRSPFPRS SRVVNLRPER
LTPADGSAQA VVVFTRPRGY FDAERDTMRF DGQSPPPGVP PKGSGVSSSR LRVAAAQPQR
AVTGEFNAER ITGLTWPAAQ QHVTVLELTY
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