| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1264 |
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| Symbol | |
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| ID | 7973188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1377746 |
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| End bp | 1378567 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791861 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002943181 |
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| Protein GI | 239814271 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0555] ABC-type sulfate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0908917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAC CCAACGCCTG GAACCCACGC TCGCGCCTGC TGGCCTGCGC AGCCCCCGCC
GCCGTGTTCT TCGCTGCCTT CTGGCTGCTG CCGGTCGTGC GCCTGCTCAC GCTGCCGGCG
AGCAAGGGCT GGTCCACCTA CTTCGCAGTG CTCACCGACT CGCGCTACCT GCAGAGCATG
GCCAACACCG TGGCACTGTC TGTGGCCGTG ACGGTGGCCA CGCTGCTGCT CGGCGCCGCC
GTCGGCATCT ACCTTGCGCG CCACGCCTTC GCGGGCAAGC GCATGCTGCT GTCGCTGCTC
ACGCTGCCGC TGTCCTTTCC AGGCGTGATC ATCGGTTTCT TCGTGATCCT GCTCGGCGGG
CGGCAAGGGC TGGTGGCCGA CATCGGCGAC AGCCTGTTCG GCCAGCGCAT CACCTTCGCC
TACGGCCTGC TCGGGCTGTT TCTCGCGTAC CTCTACTTCT CGTTGCCGCG CGCCATTGCC
ACCTATGCCG CCGCGGCCGA GGCCATGAAC ATGCAGCTCG AAGAAGCCGC GCGCTCGCTC
GGCGCCTCGC GGCTGCGCGT CGCGCGCGAC GTGTGGCTGC CCGAACTCGC GCCCACCACG
CTCGCATGCG GCGCGATCCT GTTCGCCACC TCGATGGGCG CCTTCGGCAC CGCGTTCACG
CTGGCCAGCA AGTTCGAGGT GATCCCCATC ACCATCTACA ACGAGTTCAC CAACTACGCC
AACTTCGCGC TCGCCGCATC GCTCTCGATC GCGCTGGGCC TCGTCACCTG GCTGGTGCTG
TTCGCCGCGC GGCGCTTCGG CGCCAACCCC GTCGCGCGCT GA
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| Protein sequence | MKQPNAWNPR SRLLACAAPA AVFFAAFWLL PVVRLLTLPA SKGWSTYFAV LTDSRYLQSM
ANTVALSVAV TVATLLLGAA VGIYLARHAF AGKRMLLSLL TLPLSFPGVI IGFFVILLGG
RQGLVADIGD SLFGQRITFA YGLLGLFLAY LYFSLPRAIA TYAAAAEAMN MQLEEAARSL
GASRLRVARD VWLPELAPTT LACGAILFAT SMGAFGTAFT LASKFEVIPI TIYNEFTNYA
NFALAASLSI ALGLVTWLVL FAARRFGANP VAR
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