| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1257 |
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| Symbol | |
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| ID | 7973181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1370771 |
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| End bp | 1371679 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791854 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002943174 |
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| Protein GI | 239814264 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.484482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATCC AGCAGCGCCT CACGCCTTCC ACCGTCTTCC TGCTCACCGT GCCGCCGCTG
CTGTGGGCGA GCAATGCGGT GGTCGGCCGC CTGGTGCGCG ACCTGGTGTC GCCGCTCACG
CTGAACTTCG TGCGCTGGGT GATCGCGTTC GTGCTGCTGC TGCCGCTCGC ATGGCCGGTG
CTGCGCCGCG GCAGCCCGAT GTGGGCGCAC TGGAAGCGCT ATTCGGTGCT GGGGCTGCTG
GGCATCGGCA GCTACAACGC ATTCCAGTAC CTGGCACTGC AGACCTCCGC GCCGATCAAC
GTCACGCTGG TGGGCTCCAG CCTGCCGCTG TGGATGCTGG CGGTGGGCGG CATTTTCTTC
GGCGCGCGTG TCGGCGGGCG CGAGATCGGC GGCTCGCTGC TCTCGATGCT GGGCGTGCTG
CTGGTGCTGA GCCGGGGCGA ATGGCGGCAG CTGCTCGCGC TGCGGCTGGT GCCGGGCGAT
CTCTACATGA TCCTGGGCAC CATCGCCTGG GCGTTCTACA GCTGGTTCCT CGCGCGCACG
CGGGAGCCGC AGGGCGTGCG GCAGGACTGG GCCGCGTTCC TGATGGCGCA GCTGGTGTTC
GGCCTCGCAT GGTCGGGCCT GTTCGCGGCC GGGGAATGGA CGCTGGCCGA TGCGCGCATG
GAGCTCGGAT GGCCGCTGCT GGCGGCGCTG GCCTTCATCG GCATCGGCCC GGCCGTGGTG
GCCTACCGCT GCTGGGGCAG CGGCGTGCAG CATGCGGGGC CGCAGGCCGC GAGCTTCTTC
ATGAACCTTA CGCCGCTGTT CGCCGCGCTG CTGTCCGCGG CCTTCCTGCG CGAGCCGCCG
CACTGGTACC ACGGCGCGGC CTTTGCGCTG ATCGTGGGCG GGATCGTGAT CTCGTCACGG
CGCCCATAG
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| Protein sequence | MQIQQRLTPS TVFLLTVPPL LWASNAVVGR LVRDLVSPLT LNFVRWVIAF VLLLPLAWPV
LRRGSPMWAH WKRYSVLGLL GIGSYNAFQY LALQTSAPIN VTLVGSSLPL WMLAVGGIFF
GARVGGREIG GSLLSMLGVL LVLSRGEWRQ LLALRLVPGD LYMILGTIAW AFYSWFLART
REPQGVRQDW AAFLMAQLVF GLAWSGLFAA GEWTLADARM ELGWPLLAAL AFIGIGPAVV
AYRCWGSGVQ HAGPQAASFF MNLTPLFAAL LSAAFLREPP HWYHGAAFAL IVGGIVISSR
RP
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