Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1253 |
Symbol | |
ID | 7973177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1366336 |
End bp | 1367310 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644791850 |
Product | hypothetical protein |
Protein accession | YP_002943170 |
Protein GI | 239814260 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA TCCAGTTCCT CCAAGCGGCC GCGGCGGCGC TTTGCGTGGC TGCATCGACG GCCAGCCTGG CCCAGGGCTA TCCGAACAAG CCGGTGCGGC TGATCGTGCC GTTCCCGGCG GCCGGCGCAA CCGACCTCTT CGCCCGCACG CTCGGACAGA AGATGAGCGA AAAGCTCGGC ACCTCGCTGA TCATCGACAA CAAGCCGGGC GCGGGCGGCG CCATCGGCTC CGACATGGCC GCGAAGGCGC CGGCCGACGG CTATACGCTG CTGCTGGCCA CCACCAGCAC CCACTCCATC GGGCCGGCCA TCACCAGCAA GCTGCCCTAT GACACGGTGC GCGACTTCAC GCCCATCGCG CATGTGGGCG ATGCGCCGAG CATCATGCTG GTGCCGGTCA ACTCGCCCGC AAAGACCGTG CGCGAATGGA TTGACCACGC AAAGAAGAAC CCCGGCAAGC TCAACTACGC GTCCAGCGGC AACGGCACCA TCGTGCAGCT CACTGCGGAG CTCTTCAAGG CGCAGGCCGG CGTGTTCGTG ACCCACATTC CCTACAAGGG CACCGCGCTG GCCATTCCCG ACCTGATCAG CGGCAAGGTC GACGTGCTGT TCGACTCGCT GCCCACCGGC ATGCCGCACG TGCGCGACGG CCGGCTGCGC GCGCTGGGCG TCACCACGCT CAAGCGCAGC CCGCTCGCGC CCGAACTGCC GCCGATCGCC GACACGCTGC CGGGCTTCGA GTCGAACACC TGGTTCGGCT TCTACGGTCC CAAGGGCCTG CCGGCGGACA TCGTGGCGCG CGTCAACAAA GCCGCGAACG AGGCGCTGGC CGATCCCGAG GTGAAGGAAA AGCTGTCGCG CCTGGGCATC GAGCCTGCCG CCGCCGGAAC GCCCGAGCAG TTCGCCAAAA TGGTGGCGGC CGATGCCGCC AAGTGGAAAA AGATCGTGGT CGAGCGCAAG ATCACCAACG AATAA
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Protein sequence | MKRIQFLQAA AAALCVAAST ASLAQGYPNK PVRLIVPFPA AGATDLFART LGQKMSEKLG TSLIIDNKPG AGGAIGSDMA AKAPADGYTL LLATTSTHSI GPAITSKLPY DTVRDFTPIA HVGDAPSIML VPVNSPAKTV REWIDHAKKN PGKLNYASSG NGTIVQLTAE LFKAQAGVFV THIPYKGTAL AIPDLISGKV DVLFDSLPTG MPHVRDGRLR ALGVTTLKRS PLAPELPPIA DTLPGFESNT WFGFYGPKGL PADIVARVNK AANEALADPE VKEKLSRLGI EPAAAGTPEQ FAKMVAADAA KWKKIVVERK ITNE
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