Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1251 |
Symbol | |
ID | 7973175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1363663 |
End bp | 1365174 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644791848 |
Product | protein of unknown function DUF112 transmembrane |
Protein accession | YP_002943168 |
Protein GI | 239814258 |
COG category | [S] Function unknown |
COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTGT TTGAACACCT CTCGATGGGT TTTGGCGTTG CCTTTACCTT CACCAACCTG CTGTACTGCC TGGTCGGCTG CATCCTGGGC ACCCTGATCG GCGTGCTGCC GGGCATCGGC CCGGTCGCGA CCATCGCGAT GCTGCTGCCC GCCACCTACG CGCTGCCGCC CGTGTCGGCG CTGATCATGC TGGCCGGCAT CTACTACGGT GCGCAGTACG GCGGCTCGAC CACCGCCATC CTGGTGAACC TGCCGGGCGA ATCTTCGTCG GTGGTGACCG TGATCGACGG CTACCAGATG GCGCGCAAGG GCCGTGCGGG TCCGGCGCTG GCCGCGGCGG GCCTGGGCTC GTTCTTCGCG GGCTGCGTCG GCACGCTGAT CCTCGCGGCC TTCGCGCCGC CGCTGACCGA GCTGGCCTTC AAGTTCGGCC CGGCCGAGTA CTTCTCGCTG ATGATCCTGG GCCTGATCGG CGCCGTGGTG CTGGCTTCGG GCTCGCTGCT CAAGGCCATC GCGATGATCG TGCTGGGCCT CTTGCTGGGC CTTGTCGGCA CCGACGTGAA TTCGGGCGTG GCGCGCTACA GCTTCGACGT TCCGGAACTG ACCGACGGCA TCGGCTTCGT GGCCATTGCC ATGGGTGTGT TCGGCTACGG CGAAATCATT GCCAACCTTT CGCGTCCCGA CGACGAGCGC GAAGTGTTCA CCGCCAAGGT CTCGGGCCTG TTCCCGACCA AGGAAGACTT CAAGCGGATG ATTCCCGCGG TGCTGCGCGG CACGGCGCTG GGCTCTTCGC TCGGCATCCT GCCCGGCGGC GGTGCGTTGC TGTCGGCTTT CGCGGCCTAC ACCATCGAGA AGAAGACCAA GCTGCATCCC GGCGAAGTGC CGTTCGGCAA GGGCAACATC CGCGGCGTGG CAGCTCCCGA GGCGGCCAAC AACGCCGGTG CGCAGACCTC CTTCATCCCG CTGCTCACGC TGGGCATTCC GCCCAACGCG GTGATGGCGC TGATGGTGGG CGCAATGACG ATCCACAACA TCCAGCCCGG CCCGCAGGTG ATGACCAGCA ACCCCGAGCT GTTCTGGGGC CTGATCGCCT CGATGTGGCT TGGCAACGCG ATGCTGATCA TCCTGAACCT GCCGCTCATC GGCATGTGGA TCAAGCTGCT GTCGGTGCCC TACAAGTTCC TGTTCCCGGC GATCGTGCTG TTCTGCGCCA TCGGCGTGTA CTCCACGAAC AACAACACCT GGGACATCTG GATGGTCGGC ATCTTCGGCT TCGTGGGCTA CACCTTCTTC AAGCTGGGTT GCGAGCCTGC GCCGTTGCTG CTGGGCTTCA TCCTCGGGCC GATGATGGAA GAAAACCTGC GCCGCTCGCT GCTGCTGTCG CGCGGCGACT GGAGCGTGTT CGTCACGCGT CCGATCTCGC TCGGCCTGCT GCTTGCCGCT TTGCTGCTGC TCGTGATCGT GCTGCTGCCG GCGGTCAAGG CGAAGCGCGA AGAAGCCTTC GTCGAGGATT AA
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Protein sequence | MELFEHLSMG FGVAFTFTNL LYCLVGCILG TLIGVLPGIG PVATIAMLLP ATYALPPVSA LIMLAGIYYG AQYGGSTTAI LVNLPGESSS VVTVIDGYQM ARKGRAGPAL AAAGLGSFFA GCVGTLILAA FAPPLTELAF KFGPAEYFSL MILGLIGAVV LASGSLLKAI AMIVLGLLLG LVGTDVNSGV ARYSFDVPEL TDGIGFVAIA MGVFGYGEII ANLSRPDDER EVFTAKVSGL FPTKEDFKRM IPAVLRGTAL GSSLGILPGG GALLSAFAAY TIEKKTKLHP GEVPFGKGNI RGVAAPEAAN NAGAQTSFIP LLTLGIPPNA VMALMVGAMT IHNIQPGPQV MTSNPELFWG LIASMWLGNA MLIILNLPLI GMWIKLLSVP YKFLFPAIVL FCAIGVYSTN NNTWDIWMVG IFGFVGYTFF KLGCEPAPLL LGFILGPMME ENLRRSLLLS RGDWSVFVTR PISLGLLLAA LLLLVIVLLP AVKAKREEAF VED
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