| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1244 |
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| Symbol | |
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| ID | 7973168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1357380 |
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| End bp | 1358372 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791841 |
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| Product | peptidase S1 and S6 chymotrypsin/Hap |
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| Protein accession | YP_002943161 |
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| Protein GI | 239814251 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGGC CCGCTTTCTA CAGCCGTTCG CCCCGCACGC TGCCTCAAGC GGCCGATTCC
GCGGCCCAAG AGGCTGCCGT GCCGTCGCCC GAGGGCGCAG CAGGCAATGG TGCGCCACCC
CCGCCGCACG CGAAGGCCGG CTGGCAGCCG GGCCGGCGCA GCTTCGCATT CCTGCTCGTG
CTGTGCGCCG CGCTGGTTGC AGGCGGCGCC ACCTGGTGGC CCCGGCAGGG CAAGGCGCTG
ACGCAGAAAG ACATCGATTC GGCCGTGCTG CGCACGCTGC AGACCCACAC GCTGCCCTCG
CCCGCCGCAA AGGCCGCCGA GATCGTGCGG CCCTCGGTGG TGCGGGTGGT CGGCTACGGC
CCCGAGAAGG CCACGCCCGA GGCCAAGACC CAGAAGCGCG GCCGCAACAT GGCCAAGGGC
AAGCCGCCCG AAGCCGATGC GCCTCCGGGC GAGGTCGAGC GCGGCGTGGG CACCGGGGTG
GTCATCGTCG ACAAGGGCGT GATCCTCACC AACCTGCACG TCGTGGCCGG CGCCGAGACC
ATCAAGGTCA CCTTCTCCGA CGGGCTCGAG GCCGTGGCCA CCATCACCGG TGTGCAGCCC
GAGAACGACC TCGCGGTGCT GCAGGCCCAG AAGATTCCCG ACGACCTGAT TCCCGCCGTC
ATGCGCTCGA CCGCAGACCT GCAGCCCGGC GACCAGGTGG CCGCGGTCGG CTTTCCGTTC
GGCATCGGCC CCTCGGTGTC GGCCGGCGTG GTGTCGGGCC TGAAGCGCTC GTTCCGCTCG
CCCGAGGGCA AGCAGGAACT GGGCAACCTG ATCCAGTTCG ACGCGGCAGC CAACCCCGGC
AACTCGGGCG GCCCGCTGAT CAACATGGAC GGCGAGGTGC TGGGCATCGT CACCGCCATC
CTCAACCCCA CGCAGCAGCG CACCTTCATC GGCATCGGCT TTGCGGTGCC CATAGAGAAC
GCGGCCTCGG CTGCGGGCTC GCCGCCGTTC TAG
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| Protein sequence | MRRPAFYSRS PRTLPQAADS AAQEAAVPSP EGAAGNGAPP PPHAKAGWQP GRRSFAFLLV
LCAALVAGGA TWWPRQGKAL TQKDIDSAVL RTLQTHTLPS PAAKAAEIVR PSVVRVVGYG
PEKATPEAKT QKRGRNMAKG KPPEADAPPG EVERGVGTGV VIVDKGVILT NLHVVAGAET
IKVTFSDGLE AVATITGVQP ENDLAVLQAQ KIPDDLIPAV MRSTADLQPG DQVAAVGFPF
GIGPSVSAGV VSGLKRSFRS PEGKQELGNL IQFDAAANPG NSGGPLINMD GEVLGIVTAI
LNPTQQRTFI GIGFAVPIEN AASAAGSPPF
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