Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1242 |
Symbol | |
ID | 7973166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1355218 |
End bp | 1356207 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644791839 |
Product | protein of unknown function DUF58 |
Protein accession | YP_002943159 |
Protein GI | 239814249 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCT GGTGGCGTAA GGCCCCTGCG GCCGCGAACG ACGAACGGCT CATCGCCGAG GCCGGTGGAA CGGAACGCGC GCTGCGCCGG CTCGAATGGA CCGTGATCCG CCGCCTCGAT GGCCTGCTGC AGGGCGACTA CCGCACGCTG ATGCGCGGCA CCGGGCTCGA CCTGGCCGAC CTGCGCGAAT ACCAGCACCA CGACGACGTG CGCCACATCG ACTGGAACGT CACCGCCCGC CTGCAGACGC CGCATGTGCG CGTCTTCACC GAAGACCGCG AGATGGCGGC CTGGTTCGTG CTCGACCTGA GCCGCTCGGT CGACTTCGGC TCCGGCCTCA AGGCCAAGCG CGAAATCTCC GCCGGCTTCG TCGGCGTGCT CGCGCGCCTG CTCACGCGCC ACGGCAACCG GGTGGGCGCA CTGGTCTACG GCACCGACCT CGAGGCGGTG ATTCCGCCGC GCAGCGGCCG CCGCCACGTG CTGCACCTGC TGCATGCGAT GGAGCGCCGC GCCGGCAAGG CCGAGGCCGC GCCCGCGCAA AAAGGCATGA CGCGCCTGGC CGACCTGCTG AAATCGGCCG CCACGCTGAT GCCGCGCCGC TCCACCGTGT TCGTGGTGTC CGACTTCCTG AGCGAGCCCG GCTGGGAACG CCCGCTCGGC CAGCTGGTGC AGCGGCATGA AGTCATTGCC GTGCGCCTGT TCGACCCGCT CGAACTCGAG CTGCCCGACC TCGGCCTGGT GCCGCTGCGC GACGCGGAAA CCGGCGAGCA GCTCTGGGTC GACACGCACG ACGCCGGCTT CCGCAAGCGC TTCGCGCGGC TGGCCGCCGA GCGCGAGGCC ACGCTGCGCG CCTCGCTATC GAAAGCGGGT GTCGACGCAC TGGAGCTTTC GACCAGCGAC GACCTGGTGG AAGCCATCGT TCGTTTCGCC GACCTGCGCA AGCGCCGCAT GCGCATCGGC CCGGGCAGCA TGAAGGCGGT GGCAGCATGA
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Protein sequence | MKSWWRKAPA AANDERLIAE AGGTERALRR LEWTVIRRLD GLLQGDYRTL MRGTGLDLAD LREYQHHDDV RHIDWNVTAR LQTPHVRVFT EDREMAAWFV LDLSRSVDFG SGLKAKREIS AGFVGVLARL LTRHGNRVGA LVYGTDLEAV IPPRSGRRHV LHLLHAMERR AGKAEAAPAQ KGMTRLADLL KSAATLMPRR STVFVVSDFL SEPGWERPLG QLVQRHEVIA VRLFDPLELE LPDLGLVPLR DAETGEQLWV DTHDAGFRKR FARLAAEREA TLRASLSKAG VDALELSTSD DLVEAIVRFA DLRKRRMRIG PGSMKAVAA
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