| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1227 |
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| Symbol | |
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| ID | 7973151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1341142 |
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| End bp | 1341873 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791824 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943144 |
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| Protein GI | 239814234 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGC CCATCCTTCA ACTCGACGGC TTCTGCGTCG CCTACCGCAG CGTCGAAGCG
GTGCACAGCG TGCGCCTGCA TGTGAACGAA GGCGAGATCG TCACCGTGAT CGGCCCCAAC
GGCGCCGGCA AGACCACGTT GCTGTGCGCG GCGATGGGCC TCCTGCCCTC CACCGGCGGC
CTTGCGCTGC ATGGCGAGCG CATCGCGCGC CCGAGCGTCG AGACCATGGT GGCGCGCGGC
GTGGCGCTGG TGCCCGAGCG GCGCGAGCTG TTCGGCGATA TGTCGGTCGA GGACAACCTG
CTGCTCGGCG GCTTCTACCA GTGGCGCAAG GGCAAGCGTG ACCAGCGTGC GCGCATGGAA
GAGGTGTTCG AGATCTTCCC GCGGCTGCGC GAACGCAAGC CGCAGCTCGC TTCGACGCTC
TCGGGCGGCG AGCGCCAGAT GCTGGCCATC GGCCGCGCGC TGATGGCGCG GCCCCGCCTG
CTGATGCTCG ACGAGCCATC GCTGGGCCTG GCGCCGCTGG TGGTGCGCGA AGTGCTGCGC
GTGGTCTCGC AATTGCGAAG CCATGGCGTC TCGGTGCTGC TGGTGGAGCA GAACGCACGC
GCCGCCCTGC AGGTGGCCGA CCGGGCCTAT GTGCTCGAGA TGGGCGCCGT CGCGCTCGAA
GGCCACGCAC GCGAATTGAT GCACGACCAG AGAATCATCG ACACCTACCT GGGCATCGGA
AAGAAGGAAT GA
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| Protein sequence | MSTPILQLDG FCVAYRSVEA VHSVRLHVNE GEIVTVIGPN GAGKTTLLCA AMGLLPSTGG
LALHGERIAR PSVETMVARG VALVPERREL FGDMSVEDNL LLGGFYQWRK GKRDQRARME
EVFEIFPRLR ERKPQLASTL SGGERQMLAI GRALMARPRL LMLDEPSLGL APLVVREVLR
VVSQLRSHGV SVLLVEQNAR AALQVADRAY VLEMGAVALE GHARELMHDQ RIIDTYLGIG
KKE
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