| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1226 |
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| Symbol | |
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| ID | 7973150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1338927 |
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| End bp | 1340987 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791823 |
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| Product | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase |
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| Protein accession | YP_002943143 |
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| Protein GI | 239814233 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02278] phenylacetic acid degradation protein paaN |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCC TTCAAAGCTA CATCGCCGGC CGCTGGATCG GCCAGCAGGG CGCGCAGCAG
CTGCGCAGCG CCGTCAACGG CCAGCCCGTG GCCAGCACGC ATGCCGAGGC CATCGACTTT
GCCGAAGCGC TCGCCCACGC GCGCCGCGTC GGCCTGCCCG CGCTGATGGC GCTCGACTTC
CAGCAGCGCT CCGAGCGGCT GAAGGCGCTG GCCAAGCACC TGGCCGCCCA CAAGGAAACG
CTCTACGCGA TCTCGGCCCA CACGGGCGCC ACCCGCACCG ACAGCTGGAT CGACATCGAA
GGCGGCGCCG GCACGCTCGC CGCCTATGCC GGCATCGGCA GCAACGAGCT GCCCTCGGGC
AACCTGGTGC ATGAAGGCCC GGCCTTTGCG CTCGGCAAGA AGGGGGGCTT TGCGGGCACG
CACATTCTGG TGCCGCGCGG CGGCGTGGCG GTGCACATCA ACGCCTTCAA CTTTCCGGTG
TGGGGGCTGC TCGAGAAATT CGCGCCCAGC TTTCTCGCGG GCATGCCCTG CATCGGCAAG
CCGGCCACGG CCACCAGCTA TCTCACCGAA GCGCTGGTGC GGCTCATCGT GCAGTCGGGC
ATCCTGCCCG AAGGCAGCCT GCAACTCGTG ATCGGCGGCA CGGGCGACCT GCTCGACCGG
CTCGAAGGGG CCGACGTGGT CACCTTCACC GGCTCGGCCG ACACCGCCGT CAGGCTGCGC
GTGCATCCGA ACCTGGTGCG CCACTCGATC CCGTTCAACG CCGAGGCCGA CTCGCTCAAC
TGCGCGATCC TCGCGCCCGA CGTGACGCCC GACGACGAGG AGTTCGACCT GTTCGTGAAG
GAAGTGGCGC GCGAAATGAC CGTCAAGGCC GGCCAGAAGT GCACCGCGAT CCGCCGCGCG
ATCGTGCCGC GCCAGCACCT CGATGCGGTG GCCGAACGCC TTCGCGCGCG GCTGGCCAAG
ACCGTCATCG GCGATCCCTC GCGCGAAGAG GTGCGCATGG GCGCTCTTGC CTCGCACGCG
CAGCAGGCCG ACGTGGCCGA GCGCGTCGCC ACGCTGCTGC AGGGCGCCGA GCTGGTGTAC
GGCGAGCGCG ACGGCTTCTC GCCGGTGGGC GACGGCGTGG CCGGAGGTGC CTTCTTCGCG
CCGACGCTGC TCCTGAGCCG GAGGCCCCTC GAGCACGATG CCGCGCACGA TGTCGAAGCC
TTCGGCCCCG TCAGCACGCT GATGCCTTAT GACAGTGCTG ACAGCATCGA CGAAGCCCTG
GCGCTGGCCG CGCGCGGGCG CGGCAGCCTG GTCGGAACGC TGGTCACGCG CGACCCGGCC
ATCGCGGCCA GGGCCATTCC GGTGGCCGCC GCATGGCATG GCCGCCTGCT GGTGCTCGAC
CGCGAGGCCG CGGCCGAATC GACCGGCCAC GGCTCGCCGC TGCCGCAGCT CAAGCATGGC
GGCCCGGGCC GCGCGGGCGG CGGCGAAGAG CTCGGCGGCC TGCGCGCCGT GAAGCACTAC
CTGCAGCGCG CCGCGGTGCA GGGCTCGCCC ACCATGCTGG CCGCGATCAC CGGCGAACAC
GTGCGCGGCG CGGCCGTGCG CGAGAGCGAG GTGCACCCGT TCCGCCGCCA CTTCGAGGAC
CTGCGCATCG GCGACTCGCT GCTCACGCAC CGCCGCACCG TCGGCGAGGC CGACATCGTG
GCCTTCGGCG GCATCTCGGG CGACTATTTC TACATGCACT TCGACGAAGT CGCGGCCAGG
GAGTCGCCGT TCGGCAAGCG CATCGCGCAC GGCTACTTCG TGCTGTCGGC CGCGGCGGGC
CTGTTCGTGT CGCCCGCGCC GGGCCCGGTG CTTGCCAACT ACGGCCTCGA CACGCTGCGC
TTCGTGAAGC CCGTGGGCAT CGGCGACACC ATCCGCGCAC GCCTCACTTG CAAGCGCAAG
ATCGACCGCA ACAGGAAGGA CGCGAGCGGC CAGGGACAGG GCGTGGTGGC CTGGGACGTG
GAGGTGACGA ACCAGGACGG CGAGCTGGTC GCGAGCTACG ATATCCTGAC CCTCGTCTCC
AAGAAACCAG AAACCACCTG A
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| Protein sequence | MTTLQSYIAG RWIGQQGAQQ LRSAVNGQPV ASTHAEAIDF AEALAHARRV GLPALMALDF
QQRSERLKAL AKHLAAHKET LYAISAHTGA TRTDSWIDIE GGAGTLAAYA GIGSNELPSG
NLVHEGPAFA LGKKGGFAGT HILVPRGGVA VHINAFNFPV WGLLEKFAPS FLAGMPCIGK
PATATSYLTE ALVRLIVQSG ILPEGSLQLV IGGTGDLLDR LEGADVVTFT GSADTAVRLR
VHPNLVRHSI PFNAEADSLN CAILAPDVTP DDEEFDLFVK EVAREMTVKA GQKCTAIRRA
IVPRQHLDAV AERLRARLAK TVIGDPSREE VRMGALASHA QQADVAERVA TLLQGAELVY
GERDGFSPVG DGVAGGAFFA PTLLLSRRPL EHDAAHDVEA FGPVSTLMPY DSADSIDEAL
ALAARGRGSL VGTLVTRDPA IAARAIPVAA AWHGRLLVLD REAAAESTGH GSPLPQLKHG
GPGRAGGGEE LGGLRAVKHY LQRAAVQGSP TMLAAITGEH VRGAAVRESE VHPFRRHFED
LRIGDSLLTH RRTVGEADIV AFGGISGDYF YMHFDEVAAR ESPFGKRIAH GYFVLSAAAG
LFVSPAPGPV LANYGLDTLR FVKPVGIGDT IRARLTCKRK IDRNRKDASG QGQGVVAWDV
EVTNQDGELV ASYDILTLVS KKPETT
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