| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1224 |
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| Symbol | |
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| ID | 7973148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1337581 |
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| End bp | 1338141 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644791821 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943141 |
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| Protein GI | 239814231 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTGCCT GGTTCCAGAT CTTTCTCTTC GTCGCCGGTA CGGCCGCGCT GCTGTACGTT
TCGCGCGGCC CGCTGCGCCA GCCCGGCTCG CATGGCTTCT ACCGCTTCTT CGCGTGGGAA
TGCATGCTGG CGCTGATCAT CGTGAACCTG CCGGTGTGGC ATGTGGACCC GCTGTCGTTC
ACCCAGCTGC TGTCCTGCGT ATTCCTCGCG CTGTCGATCT GGCTGCCGAT CCATGCGGTG
AAACTGCTCA AGGCCCACGG CAAGCCGACC GAGGCGCGCA GCGACGATCC GGCGCTCTAC
GGTTTCGAGA AGACCTCTTC CATTGTTTCG ACCGGCGCCT TCCGCTACAT CCGCCACCCG
ATGTACACGG CGCTGATGCT GCTGGCCTGG GGCGCCTTCC TCAAGCAGTT CACCTGGCTC
ACGCTGGCGC TGGTGATGGC GGCCACGGTG CTGCTGTTCC TCACGGCCCT GAGCGACGAG
AAGGAATGCA TTGCGCACTT CGGCGACGAC TACCGCGAAT ACATGCGCGG CACGCGGCGC
TTCATTCCGT TCGTGCTGTA A
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| Protein sequence | MLAWFQIFLF VAGTAALLYV SRGPLRQPGS HGFYRFFAWE CMLALIIVNL PVWHVDPLSF
TQLLSCVFLA LSIWLPIHAV KLLKAHGKPT EARSDDPALY GFEKTSSIVS TGAFRYIRHP
MYTALMLLAW GAFLKQFTWL TLALVMAATV LLFLTALSDE KECIAHFGDD YREYMRGTRR
FIPFVL
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