Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1218 |
Symbol | |
ID | 7973388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1331056 |
End bp | 1332033 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644791815 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_002943135 |
Protein GI | 239814225 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCG CCGCTCCCCT CATCGAAGTC CGCGGACTCA AGAAATACTT CGGCGCCAGC GACCGCCCGG TGCGCGCGGT CGACGACGTG TCTTTCGCGA TCCAGCCCGG CGAAACGCTG GGCCTGGTCG GCGAATCGGG CTCGGGCAAG AGCACCATCG GCCGCACCGT GCTGCGCCTG GTCGAGCGCA CCGAGGGCCA GGTGCTCTAC CGCGGCGACG ACATCGGCGC GCTGTCGGGC GAACGCATGC GCCGGCTGCG CAGCAAGCTG CAGATCATCT TCCAGGACCC CTATGCGAGC CTGAATCCGA AGATGCGCAT CAGCGCGATC CTCGGCGAGG CGCTGTCCAC GCACGGCCTG CACAAGGGCG CGGCGGCGCG CGACAAGCGC ATTGCCGAGC TGCTCGAAAC CGTGGGCCTG CGCGCCGAGC ATGCCAGCCG CTTCCCGCAC GAGTTCTCGG GCGGGCAGCG CCAGCGCATC GGCGTGGCGC GCGCGCTGGC CGTGGAGCCC GAGTTCATCG TGGCCGACGA GCCGCTGTCG GCGCTCGACG TGTCGATCCA GTCGCAGGTC ATCAACCTGC TGGCCGACCT GCGCGAGCGG CTCGGCCTCA CCATGCTCTT CATCTCGCAC GACCTCGACG TGGTCGAGTA CCTGTGCGAC CGCGTGGTGG TGCTGTACCT CGGCAAGGTG ATGGAAGTGG CGACCACCGA CGAGCTGTTC GCGCGGCCTT CGCATCCCTA CACGCAGGCG CTGCTGGCCG CGAGCCCGAA GCCCGACCCG ACGCTTGCCA CCGAGCGCAT CGCGCTCAAG GGCGATATCC CGAGCCCGAT CTCGCCGCCC TCGGGCTGCG TGTTCCGCAC CCGCTGCCCG CACGCCATCG AGGCCTGTGC GCAGACGGTG CCGCCGCTCG ACGAGATTTC CGCCGGACAC TACAGCGCCT GCATCCGAAA AGAGCTGCTC TCCAACATTG CCGCATGA
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Protein sequence | MTTAAPLIEV RGLKKYFGAS DRPVRAVDDV SFAIQPGETL GLVGESGSGK STIGRTVLRL VERTEGQVLY RGDDIGALSG ERMRRLRSKL QIIFQDPYAS LNPKMRISAI LGEALSTHGL HKGAAARDKR IAELLETVGL RAEHASRFPH EFSGGQRQRI GVARALAVEP EFIVADEPLS ALDVSIQSQV INLLADLRER LGLTMLFISH DLDVVEYLCD RVVVLYLGKV MEVATTDELF ARPSHPYTQA LLAASPKPDP TLATERIALK GDIPSPISPP SGCVFRTRCP HAIEACAQTV PPLDEISAGH YSACIRKELL SNIAA
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