| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1211 |
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| Symbol | |
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| ID | 7973381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1324536 |
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| End bp | 1325213 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791808 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_002943128 |
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| Protein GI | 239814218 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACG TGGTTCTCAA GGCGCGCGGC CTCACCAAGC GCTTTCACGA GGGGCGCATC
GACCTCACGG TGCTGCACGG CGTCGACCTG GACGTGCGCG CCGGGGAGAC GCTGGCCATC
GTCGGCGCCT CGGGCTCGGG CAAGAGCACG CTGCTGCACC TGATGGGCGG GCTCGATGCG
CCCACCGCCG GCAAGGTCGA GCTGCTCGGC AAGGACATCG CGCATGCCGA CGCGGCCGAG
CAGGGACGGC TGCGCAACCT GCACCTGGGC TTCGTCTACC AGTTCCACCA CCTGCTGCCC
GAGTTCAGCG CGCTTGACAA CGTGGCGATG CCGCTCAAGA TCCGGCGCAT GGATTCCGCA
CAGGCGGCGG CCTCGGCCAC GAAGATCCTC GAAAGCGTGG GCCTGGGCGA ACGCCTGCAT
CACCGGCCGG CCGAGCTCTC GGGCGGCGAG CGCCAGCGCG TGGCCATTGC GCGCGCGCTG
GTCACGCAGC CGGCCTGCGT GCTGGCCGAC GAGCCCACGG GGAACCTCGA CCGCAGCACG
GCGGACACGG TGTTCGCGCT GATGATCGAG CTCGCGCACA AGCACCGCAC GGCCTTCGTG
ATGGTCACGC ACGACCAGGA ACTCGCAAAG CGCTGCGACC GCGTGCTGCA ACTGGTGGCG
GGACGTCTGG CGGGTTGA
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| Protein sequence | MSDVVLKARG LTKRFHEGRI DLTVLHGVDL DVRAGETLAI VGASGSGKST LLHLMGGLDA
PTAGKVELLG KDIAHADAAE QGRLRNLHLG FVYQFHHLLP EFSALDNVAM PLKIRRMDSA
QAAASATKIL ESVGLGERLH HRPAELSGGE RQRVAIARAL VTQPACVLAD EPTGNLDRST
ADTVFALMIE LAHKHRTAFV MVTHDQELAK RCDRVLQLVA GRLAG
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