| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1209 |
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| Symbol | |
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| ID | 7973379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1322183 |
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| End bp | 1323151 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644791806 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943126 |
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| Protein GI | 239814216 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4255] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAC CTTCCTCCCG TCACTTGTTG ATCCCCTTTG CCGGCCGCGG TTCCCCGGTG
TGCCGCGCGG CACTGCCCGC GCTCCGGCTT CCCAATCTCG AAGCGCTGCT CTCGCGGCTC
TCGCTCGCGG AGGCCGACAC GCAGGACGAA AGCACGCGCT CGCCGCCCCA TGAACGCGCG
CTGGCCCGGG CGCTGGGCAT TTCCGCAGCC GACGGCTGCA TTCCCTGGGC CGCGCTGGAA
GCCCGGCAGG CCGGCATTGC CGAACCCGGC GACCGCGAAG GCTGGGGCCT GGTCTCGCTG
TGCAACTGGC AGGTGGGCAT CGACGACGTG GTGCTGGGCG ACCCGGCCGC GATCGAGATC
GATGCTGCCG AATCGGCCGC GCTGCTGGCC GCCGCCCATC CCTTCTTCGA GGAAGACGGC
ATCGCGCTGC ACCCCTCCCC CACACCCGGC CGCTGGCTCG CGCGCGCGCA CATCTTCGCG
GGACTGGCCA CGGCCTCCAT CGACCGCGCG GTGGGCCACC CGATCTCGCA GTGGTCGCCG
CTGGCCGAAG CCGCACGGCC GCTGCGCCGC CTCCAGAACG AAATGCAGAT GCTGCTCTAC
ACCCAGCGCG TGAACGACGA CCGCGCCGCG CGCGGCGTGC CGCCGATCAA TTCCTTCTGG
CTCAGCGGCA CCGGCGCCCT GGAGCCCGGC GTTCCCCCGG CCGGCACCGC CGCGCCCACG
GTGAGCGACA CGCTGCGCGT GGCCGCCCTG CGCGACGACG GCCTGGGCTG GGCCGAAGCC
TGGCAGGCGC TGGACGCAGG CCCCGTCGCC GGCCTGCTGG CCGCCTACAC CGCCGGTGCC
GACGTCACGC TCACGCTGTG CGGCGACCGC ACCGCGCAGC GCCATGCGGT GCAGCCGCGC
GGGCTGGTGG GCTGGGCCCG AAGCCTGTTC GACCGGCCGC GCGCCGCCAG CGTGCTGGAG
GCCCTGTGA
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| Protein sequence | MAEPSSRHLL IPFAGRGSPV CRAALPALRL PNLEALLSRL SLAEADTQDE STRSPPHERA
LARALGISAA DGCIPWAALE ARQAGIAEPG DREGWGLVSL CNWQVGIDDV VLGDPAAIEI
DAAESAALLA AAHPFFEEDG IALHPSPTPG RWLARAHIFA GLATASIDRA VGHPISQWSP
LAEAARPLRR LQNEMQMLLY TQRVNDDRAA RGVPPINSFW LSGTGALEPG VPPAGTAAPT
VSDTLRVAAL RDDGLGWAEA WQALDAGPVA GLLAAYTAGA DVTLTLCGDR TAQRHAVQPR
GLVGWARSLF DRPRAASVLE AL
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