Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1201 |
Symbol | |
ID | 7973370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1314215 |
End bp | 1315651 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644791797 |
Product | Cytochrome b/b6 domain protein |
Protein accession | YP_002943118 |
Protein GI | 239814208 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.690827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAT TCCACGAAAT TTCCCCCAAC GCGCCCGCCG GCGAGAAGCT GCTCAACTGG GTCGACAACC GCTTCCCGCT GAGCAAGCTC TGGAACGACC AGTGGGGCAA GTACTACGCG CCGAAGAACT TCAACTTCTG GTACATCTTC GGCTCGCTCG CGATGCTGGT CCTCGTGATC CAGATCGTGA CCGGCATCTT CCTCGTGATG CACTACAAGC CCGACGCGAA CCAGGCGTTC GCATCGGTCG AGTACATCAT GCGCGACGTG CCCTGGGGCT GGCTCATCCG CTACATCCAC TCGACGGGCG CCTCGGCGTT CTTCATCGTG GTGTACCTGC ACATGTTCCG CGGCCTCATG TACGGCAGCT ACCGCAAGCC GCGCGAGCTG ATCTGGGTCT TCGGCTGCGC GATCTTCCTG TGCCTGATGG CCGAGGCCTT CATGGGCTAC CTGCTGCCAT GGGGCCAGAT GAGCTACTGG GGCGCCCAGG TGATCGTGAA CCTGTTCGCG GCCATCCCGT TCATCGGCCC TGACCTCGCG CTGCTGATCC GCGGCGACTA CGTGGTGAGC GACGCCACGC TGAACCGCTT CTTCAGCTTC CACGTGATCG CCGTGCCGCT GGTGCTGCTC GGCCTGGTGG TGGCCCACCT GATCGCGCTG CACGAAGTGG GCTCCAACAA CCCCGACGGC ATCGAGATCA AGGCCAAGCG CGGCCCCGAC GGCCATCCGC TGGACGGCAT TCCGTCGCAT CCGTACTACA CGGTGCACGA CATCTTCGGC GTGGTGGTGT TCCTCACGAT CTTCTCGGCC GTGATCTTCT TCGCGCCGGA AGCGGGCGGG TACTTCCTCG AGTACAACAA CTTCATTCCG GCCGATTCGC TCAAGACGCC GAACCACATT GCGCCGGTCT GGTACTTCAC GCCGTTCTAT TCGATGCTGC GTGCAACCAC CGACGACATG GTCAACGTGT TCGCGCTGAT CATCGCCGCG GCCGCCGTCC TGAACTTCAT CAAGGGCAAG TCGAGCATGG CCCTGAAGAT CGCGCTGGTC GTCGTGGCGG CCGTGGTCAT CTTCCTGCTC AAGGCCTTCG ACGCCAAGTT CTGGGGCGTG CTCGTGATGG GCGGCTCGGT CATCATCCTG TTCTTCCTGC CATGGCTCGA CAAGAGCGAA GTCAAGTCGA TCCGCTACCG TCCGGGCTGG CACAAGTATG TCTACGGCGT CTTCGTGTTC TTCTTCCTGA TCCTGGGCTA CCTGGGCATC CAGGCGCCCG GCGTCTGGGG CAGCCTGGTC ATCGGTTCGT TCGCGCTGGA CATCGCGCAG ACCATTTCCC AGATCGGCAC GCTTTTCTAC TTCGGTTTCT TCCTGCTCAT GCCCTGGTGG AGCAGCAAGG GCGAGTTCAA GCCCGTGCCT GAGCGCGTGA CCTTCGCCGC CCATTGA
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Protein sequence | MAEFHEISPN APAGEKLLNW VDNRFPLSKL WNDQWGKYYA PKNFNFWYIF GSLAMLVLVI QIVTGIFLVM HYKPDANQAF ASVEYIMRDV PWGWLIRYIH STGASAFFIV VYLHMFRGLM YGSYRKPREL IWVFGCAIFL CLMAEAFMGY LLPWGQMSYW GAQVIVNLFA AIPFIGPDLA LLIRGDYVVS DATLNRFFSF HVIAVPLVLL GLVVAHLIAL HEVGSNNPDG IEIKAKRGPD GHPLDGIPSH PYYTVHDIFG VVVFLTIFSA VIFFAPEAGG YFLEYNNFIP ADSLKTPNHI APVWYFTPFY SMLRATTDDM VNVFALIIAA AAVLNFIKGK SSMALKIALV VVAAVVIFLL KAFDAKFWGV LVMGGSVIIL FFLPWLDKSE VKSIRYRPGW HKYVYGVFVF FFLILGYLGI QAPGVWGSLV IGSFALDIAQ TISQIGTLFY FGFFLLMPWW SSKGEFKPVP ERVTFAAH
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