Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1200 |
Symbol | |
ID | 7973369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1313583 |
End bp | 1314200 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644791796 |
Product | ubiquinol-cytochrome c reductase, iron-sulfur subunit |
Protein accession | YP_002943117 |
Protein GI | 239814207 |
COG category | [C] Energy production and conversion |
COG ID | [COG0723] Rieske Fe-S protein |
TIGRFAM ID | [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.429419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACA TGACCTCCGG CTCCCCCCGG ATCGACACAA GCAAGCGGAC GTGGTTAATC GCATCCAGCT GTGCCGGCGT AGCGGGAGGC GTGGCCACCG CGATTCCCTT TGTGAGTACG TTCCAGCCCT CCGAGAAGGC CAAGGCCGCG GGCGCTGCCG TCGAAGTCGA CATCGGCGGC CTCAAGGTCG GCGAGAAGAT CACCGTCGAG TGGCGCGGCA AGCCCGTCTG GATCCTCAAG CGCTCGCCCG AGCAAGTGGC CGAGCTCCCC AAGCTCGACG GCCAGCTGGC CGATCCGCTC TCCAAGCGGC ACCCCGACGA ATTCACCCCC AAGTACGCGC AGAACGAGCA CCGCTCGATC AAGCCCGACG TGCTGGTGGT GGTGGGCATC TGCACCCACC TGGGCTGCTC GCCGACCGAC CGCTTCCAGG CCGGCCCGCA GCCTTCGCTG CCCAGCGACT GGGAAGGCGG CTTCCTCTGC CCCTGCCACG GTTCCACGTT CGACCTGGCC GGCCGCGTCT TCAAGAACAA GCCCGCGCCC GACAACCTGC CTGTGCCGCC GCACATGTAC CTGTCGGACA CCAAGCTCCT GATCGGTGAA GACTCCAAGA AGGCCTGA
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Protein sequence | MSDMTSGSPR IDTSKRTWLI ASSCAGVAGG VATAIPFVST FQPSEKAKAA GAAVEVDIGG LKVGEKITVE WRGKPVWILK RSPEQVAELP KLDGQLADPL SKRHPDEFTP KYAQNEHRSI KPDVLVVVGI CTHLGCSPTD RFQAGPQPSL PSDWEGGFLC PCHGSTFDLA GRVFKNKPAP DNLPVPPHMY LSDTKLLIGE DSKKA
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