| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1190 |
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| Symbol | |
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| ID | 7973359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1300540 |
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| End bp | 1300995 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644791786 |
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| Product | protein tyrosine phosphatase |
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| Protein accession | YP_002943107 |
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| Protein GI | 239814197 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.664548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCG TCCTGACAGT CTGCATCGGC AACATCTGCC GCAGCCCGAT GGCCGAAGGC
ATCCTGGCCG CGGGCCTGCC GCACCTGCGC GTGGTGTCGG CCGGCACCGG CGCTCTCGTG
GGCAAGCCGG CCGACGCGAT GGCGCAAAAG CTCATGCAGG AGCGCGGCAT CGACATTTCC
GGCCACCTGG CGCAGCAGGT GAACCAGATG CTGTGCCGGC AGGCGGACCT GATCCTGGTC
ATGGACATGG CGCAGCGCCG CCATCTCGAG TCGGCCTACC CCTTTGTGCG CGGCAAGGTC
TTTCGCATTG CCGAGGCCGC CAAGCAGGAT GTGCCCGATC CCTACCAACA GGACGAGGCG
GCCTTCGAGC ATGCCCTGGC GCTCATCGAC GTGGGAGCCA GGACGTGGAT CGACCGCATT
TTGAAAATTA CAAAACCTGA GCAGCAACCG ACATGA
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| Protein sequence | MKSVLTVCIG NICRSPMAEG ILAAGLPHLR VVSAGTGALV GKPADAMAQK LMQERGIDIS
GHLAQQVNQM LCRQADLILV MDMAQRRHLE SAYPFVRGKV FRIAEAAKQD VPDPYQQDEA
AFEHALALID VGARTWIDRI LKITKPEQQP T
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