Gene Vapar_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1188 
Symbol 
ID7973357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp1298316 
End bp1299008 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content61% 
IMG OID644791784 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_002943105 
Protein GI239814195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATT TCTGGTTAAT TGCCACCGGC TTCGGTGACA GCGGCTTCCT GTTGCCCACC 
GCATTGGGAA TTGCTATTTG GCTCGCAATC GACCGCGGCA CGCGCCCGGC GGCGGTGCGG 
TGGACGCTGC TATTCGGCGG TTGCGGTTTC ATCGTGATGC TGTCCAAGCT TCTGTTCATG 
GGCTGGGGCA TTGGCAGCGC CCATTTCGAT TTCATCGGCT TCAGCGGACA TACCGCGCTG 
GCAACCAGCG TCTGGCCGGT CGTTTTCTGG CTGGCGGCGC GGCGCCGCGC ACCAAAGGTG 
CGCATGGCGG CTGCGGTATC GGGATGGGTA TGGGGCGTCT TCATCGGCGT GTCGCGCCTG 
GCCCTCGAAG TTCACTCCAC CGCAGAGGTC GTCACGGGTG CGATGCTTGG AACAGTTGTA 
AGCGCAAGCT TTTTGCTGTT GCATTGGCAC CAGTCCATGT TGGTCAGAAC ACCCCGCTGG 
CTCACCTTGG CGATGGCGCT GCCGCTCCTC TTTTTCATAG TGGGGCGGCC TGCACCCACA 
CAGGACGCGC TGGAAACGCT TGCCGCGTGG ATGGCGGGCA TCGAGCGCCC GTTCACCCGT 
GCCGATCTCC TGCAGAACCG CAGGGCCGTG CGTCAGCCTG CCAACAGCAC ACAGTTCCTT 
ACAAAAGAGC AAAGCTTTTC ACCAAGCGAT TGA
 
Protein sequence
MNNFWLIATG FGDSGFLLPT ALGIAIWLAI DRGTRPAAVR WTLLFGGCGF IVMLSKLLFM 
GWGIGSAHFD FIGFSGHTAL ATSVWPVVFW LAARRRAPKV RMAAAVSGWV WGVFIGVSRL 
ALEVHSTAEV VTGAMLGTVV SASFLLLHWH QSMLVRTPRW LTLAMALPLL FFIVGRPAPT 
QDALETLAAW MAGIERPFTR ADLLQNRRAV RQPANSTQFL TKEQSFSPSD