| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1185 |
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| Symbol | |
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| ID | 7973354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1295864 |
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| End bp | 1296637 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791781 |
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| Product | protein of unknown function DUF34 |
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| Protein accession | YP_002943102 |
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| Protein GI | 239814192 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0327] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA CTCGCCATGA ATTGCTGCAT GCCTTCGACC TGCTCCTTGC GCCCTCGCGC
TTCAAGGACT ACGGACCCAA TGGCCTGCAG GTCGAGGGCC GCACCGTGGT GCGGAAGATC
GTCTCCGGCG TCACGGCGAG CCGCGCGCTC ATCGAGGCCG CCATCCATGC CGAGGCCGAC
GCGATCTTCG TGCACCACGG CCTGTTCTGG CGCGGCCAGG ACGGCTGCGT CACCGGCTGG
ATGAAGCAGC GCCTGGGGCT GCTGCTGGGC GACGACGTCA ACCTTTTTGC CTATCACCTG
CCGCTCGATG CGCATCCGGA GCTGGGCAAC AACGCACAGC TCGGCCTGCA GCTCGGCCTG
CTCGCCCATG CGGGCTCGAC CGGGCGCTTC GGCGAGCAGG AGCTGGGCTT CCTGGGCGCG
CGCGACAACG GGGAAGCCTT TGCCAGCGCC AAGGAACTGG CCGCGCACGC GGAAAAGGTG
CTGAAGCGGT CCGTCACCCT CGTGGATACG GCGCACCGCC CGATCAAGAA CGTCGCGTGG
TGCACGGGCG GCGCCCAGGG CTACTTCGAG GCGGCCATTG CGGCCGGGGC CGACGCCTTC
ATCACCGGCG AGATCTCCGA ACCCCAGGCC CACTACGCCC GCGAGATGGG CGTCGCCTTC
CTGGCCTGCG GCCACCATGC CACCGAGCGC TACGGCGCGC AGGCGGTGGC CGGGCACGTG
GCGGCCCAGC TCGGGCTGAA GCACGAGTTC ATCGACATCG ACAATCCGGC ATGA
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| Protein sequence | MSTTRHELLH AFDLLLAPSR FKDYGPNGLQ VEGRTVVRKI VSGVTASRAL IEAAIHAEAD
AIFVHHGLFW RGQDGCVTGW MKQRLGLLLG DDVNLFAYHL PLDAHPELGN NAQLGLQLGL
LAHAGSTGRF GEQELGFLGA RDNGEAFASA KELAAHAEKV LKRSVTLVDT AHRPIKNVAW
CTGGAQGYFE AAIAAGADAF ITGEISEPQA HYAREMGVAF LACGHHATER YGAQAVAGHV
AAQLGLKHEF IDIDNPA
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