| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1179 |
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| Symbol | |
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| ID | 7973348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1291027 |
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| End bp | 1291386 |
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| Gene Length | 360 bp |
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| Protein Length | 119 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791775 |
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| Product | histidine triad (HIT) protein |
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| Protein accession | YP_002943096 |
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| Protein GI | 239814186 |
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| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCTG ATCCGAACTG CGTCTTCTGC AAAATCATCG AAGGCAAGAT TCCTTCGCGC
AAGGTCTACG AGGACGACGA ACTGTTCGGC TTTCATGACA TCGCCCCCTG GGCGCCGGTG
CACTTCATGC TGGTGCCCAA GCGGCACATC GCCTCGATGG CGCAGCTCAC GCCCGACGAC
GCCGCGCTGA TGGGCCGGAT CATGACGCTG GCACCCCGGC TCGCGCTGGA ACAGGGCTGC
AGGCCCTATC CGGAGGGCGG CTACCGGGTC GTCGTCAACA CCGGCGCCGA GGGCGGGCAG
GAGGTTCACC ATCTCCATGT CCACGTCATG GGCGGCCCCC GCCCGTGGCT GCGCGGCTGA
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| Protein sequence | MSSDPNCVFC KIIEGKIPSR KVYEDDELFG FHDIAPWAPV HFMLVPKRHI ASMAQLTPDD
AALMGRIMTL APRLALEQGC RPYPEGGYRV VVNTGAEGGQ EVHHLHVHVM GGPRPWLRG
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