| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1174 |
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| Symbol | |
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| ID | 7973343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1288192 |
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| End bp | 1289028 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791770 |
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| Product | Aldose 1-epimerase |
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| Protein accession | YP_002943091 |
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| Protein GI | 239814181 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCA GCCCGATCGA GTTCCGCGGC CAGCCCGCGC TTCGTGCCGC CGGCGCCGAC
GGCGGTGCCT TCACCGTGGC GCTGCACGGG GCGCAGCTGC TTTCCTGGAC CACCGCCGAT
GGGACGGAAA GGCTCTACCT GAGCCCCTCT GCGGTGTTCG ACGGACAGGC GGCGATCCGC
GGCGGCGTGC CCATCTGCTG CCCCCAGTTC AACCAGCGCG GCATGTTGCC CAAGCATGGA
TTCATGCGCA ATCTGCCTTG GGAGAACCGG GGTATCGATG CCACATCGGG CGAACTGACC
CTGCGGCTGC GCGACAGCGA GGCCACGCGC AGGCTCTGGC CGCACGCTTT CGAGGCGCGG
CTGCAGATCG GCATGGCTGC GGGCCGGCTG CGCACCGCGC TGACGCTGCT CAATACCGGC
CATGGCCCGT TCAGCTTCGC AGCCGCCCTG CACACCTACC TGCGCGTCGA CGACATCGCG
CAGGTGCGCC TCGAAGGCCT GCAGGGTGCC AACCGCTGGG ATTCGCTGCG CGACGACCGC
CACGTGGAAA CGGCCCCGGC GCTGCATTTC AGTGCCGAGT TCGACAGCGT CTATGCCGCG
CCCGCGAAGC CGCTGCGCCT GGTGCAGCCG AGCGGCACGC TCGAAATCGC GCAAAGCGCC
AGCTGCAGCG AAACCGTGGT CTGGAACCCC GGCGCCGTGC TCGGTGCGAA ACTCGCCGAC
ATGCCCGAAG ATGGCTACAG GCACATGCTC TGCGTGGAGG CCGCGCGCAT CGACGAGCAG
GTGCTGCTCG CGCCCGGCGC CCAATGGCAG GGCTGGCAGC AGCTTCGCGT TTCCTGA
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| Protein sequence | MDISPIEFRG QPALRAAGAD GGAFTVALHG AQLLSWTTAD GTERLYLSPS AVFDGQAAIR
GGVPICCPQF NQRGMLPKHG FMRNLPWENR GIDATSGELT LRLRDSEATR RLWPHAFEAR
LQIGMAAGRL RTALTLLNTG HGPFSFAAAL HTYLRVDDIA QVRLEGLQGA NRWDSLRDDR
HVETAPALHF SAEFDSVYAA PAKPLRLVQP SGTLEIAQSA SCSETVVWNP GAVLGAKLAD
MPEDGYRHML CVEAARIDEQ VLLAPGAQWQ GWQQLRVS
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