| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1170 |
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| Symbol | |
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| ID | 7973339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1283812 |
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| End bp | 1284555 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791766 |
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| Product | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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| Protein accession | YP_002943087 |
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| Protein GI | 239814177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCTCA TTCCCGCCAT TGATCTCAAA GACGGCCACT GCGTTCGCCT CAAGCAGGGC
GACATGGACC AGTCCACCAT CTTCAGCGAA GACCCCGCCG CCATGGCCCG CAAGTGGGTC
GAGGCCGGCG CGCGGCGGCT GCACCTGGTC GACCTGAATG GCGCCTTCGC CGGCAAGCCG
CAGAACCACG CGGCCATCAA AGCGATCCTG CGCGAGGTGG GCGACGACAT CCCGGTGCAG
CTGGGCGGCG GCATCCGCGA CCTGGACACC ATCGAGCGCT ACATCGACGA CGGCCTGCGC
TACGTGATCA TCGGCACCGC CGCGGTCAAG AACCCGGGCT TCCTGAAGGA CGCCTGCGTG
GCCTTCGGCG GCCACATCAT CGTGGGGCTC GACGCCAAGG ACGGCAAGGT GGCCACCGAC
GGCTGGAGCA AGCTCACGGG CCACGAGGTG GCCGACCTGG GCAAGAAGTT CGAGGACTAC
GGCGTCGAAT CGATCATCTA CACCGACATC GGCCGCGACG GCATGCTCTC GGGCATCAAC
ATCGATGCCA CCGTCAAGCT CGCGCAGGCC TTGACCATTC CGGTGATCGC CTCGGGCGGC
CTGTCGAACA TGGCCGACAT CGACCAGCTC TGCGCGGTCG AGTCCGAGGG CGTCGAAGGC
GTGATCTGCG GCCGGGCCAT CTATTCGGGC GACCTCGACT TCGCCGCCGC GCAGGCCCGC
GCGGACGAGC TCGCCGGCGC CTGA
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| Protein sequence | MLLIPAIDLK DGHCVRLKQG DMDQSTIFSE DPAAMARKWV EAGARRLHLV DLNGAFAGKP
QNHAAIKAIL REVGDDIPVQ LGGGIRDLDT IERYIDDGLR YVIIGTAAVK NPGFLKDACV
AFGGHIIVGL DAKDGKVATD GWSKLTGHEV ADLGKKFEDY GVESIIYTDI GRDGMLSGIN
IDATVKLAQA LTIPVIASGG LSNMADIDQL CAVESEGVEG VICGRAIYSG DLDFAAAQAR
ADELAGA
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