| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1165 |
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| Symbol | hisD |
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| ID | 7973334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1279653 |
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| End bp | 1280975 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791761 |
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| Product | histidinol dehydrogenase |
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| Protein accession | YP_002943082 |
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| Protein GI | 239814172 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCGA AAGCAGCCCC CGTCCGCCTC TCCACGGCTT CAGCCGGCTT CGACGCTGAA
TTCAAGGCGC GGCTGCATTG GTCCGCGGAT GCCGATGCGG CCATCGAGAA GGTGGTGGCG
GACATCCTGG CCGACGTGCA GAGGCGCGGG GACGAGGCGG TGCTGGAGTA CACCAATCGC
TTCGACAAGC TCGATGCGAA GACGCTGTCC GAGCTGGAGC TAACGCAGGC CGAACTCAAG
GCCGCCTTCG AATCATTGCC GGCCACGCAG CGCGATGCGC TCGAAGCCGC CGCTCGCCGC
GTGCGCAGCT ATCACGAGGC GCAGAAGAAG GCCAGCGGCG AGAGCTGGAG CTATCGCGAT
GCCGACGGCA CGCTGCTCGG CCAGAAGGTC ACGCCGCTCG ATCGCGTCGG CATCTACGTG
CCGGGCGGCA AGGCGGCCTA TCCGTCGAGC GTGCTGATGA ATGCCATTCC GGCTCACGTG
GCCGGCGTGG CCGAAATCAT CATGGTGGTT CCGACGCCGG GCGGCGAAAA GAACCAGCTG
GTGCTCGCCG CCGCCTACGT GGCGGGCGTC ACGCGCGCCT TCACGATCGG CGGCGCGCAG
GCCGTGGCCG CGCTGGCCTA CGGCACCGCC ACCATTCCCG CGGTCGACAA GATCACCGGC
CCCGGCAACG CCTACGTGGC CGCCGCCAAG CGCCGCGTGT TCGGCACCGT GGGCATCGAC
ATGATCGCGG GCCCGAGCGA AATCCTCGTC TTGGCCGACG GCAGCACGCC GCCCGACTGG
GTGGCGATGG ACCTGTTCAG CCAGGCCGAG CACGACGAGC TCGCGCAAAG CATCCTGCTG
TGCCCCGACG CCGCGTACAT CGACCGCGTG CAGGCAGAGA TCGACCGCCT GCTGCCCGGC
ATGCCGCGCG CCGAGATCAT CGCGGCTTCG CTCAACGGCC GCGGCGCTCT CATCCACACC
AAGAGCATGG AAGAGGCCTG CGAGATCAGC AACCGCATCG CGCCGGAGCA CCTGGAAGTC
AGCAGCAGCG AGCCGCAGCG CTGGGAGCCG CTGCTGCGCC ATGCCGGCGC GATCTTCCTG
GGCGCCTTCA CCAGCGAGAG CCTGGGCGAC TACTGCGCGG GCCCCAACCA CGTGCTGCCC
ACGAGCGGCA CGGCGCGCTT CTCGAGCCCG CTGGGCGTGT ACGACTTCCA GAAGCGCTCC
AGCCTCATCG AAGTCAGCGA AGCCGGCGCG CAGGTGCTCG GCCCCATTGC CGTCACGCTG
GCCGAAGGCG AAGGCCTGCA GGCGCACGCC GAAGCGGCGC GCATGCGGCT GCGCAGGGCC
TGA
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| Protein sequence | MTPKAAPVRL STASAGFDAE FKARLHWSAD ADAAIEKVVA DILADVQRRG DEAVLEYTNR
FDKLDAKTLS ELELTQAELK AAFESLPATQ RDALEAAARR VRSYHEAQKK ASGESWSYRD
ADGTLLGQKV TPLDRVGIYV PGGKAAYPSS VLMNAIPAHV AGVAEIIMVV PTPGGEKNQL
VLAAAYVAGV TRAFTIGGAQ AVAALAYGTA TIPAVDKITG PGNAYVAAAK RRVFGTVGID
MIAGPSEILV LADGSTPPDW VAMDLFSQAE HDELAQSILL CPDAAYIDRV QAEIDRLLPG
MPRAEIIAAS LNGRGALIHT KSMEEACEIS NRIAPEHLEV SSSEPQRWEP LLRHAGAIFL
GAFTSESLGD YCAGPNHVLP TSGTARFSSP LGVYDFQKRS SLIEVSEAGA QVLGPIAVTL
AEGEGLQAHA EAARMRLRRA
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