Gene Vapar_1164 details

Gene Information

• Locus tag: Vapar_1164
• Symbol: hisG
• ID: 7973333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 1279000
• End bp: 1279641
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644791760
• Product: ATP phosphoribosyltransferase catalytic subunit
• Protein accession: YP_002943081
• Protein GI: 239814171
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0040] ATP phosphoribosyltransferase
• TIGRFAM ID: [TIGR00070] ATP phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.746546
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCACCC TCGCGCTCTC GAAGGGCCGC ATCTTCGAAG AGACGATGCC GCTGCTGGCC 
GCCGCCGGCA TCGAGGTCAC CGAAGACCCC GAAAAATCGC GCAAGCTGAT CCTGGCTACC 
ACCCGGCCCG ACGTGCGCGT GGTGCTGGTG CGCGCCTCCG ATGTGCCCAC CTACGTGCAG 
TACGGCGGCG CCGACCTTGG CGTGACCGGC CTGGACGTGC TGCTGGAAAA CGGCAACCAG 
GGCATGTACC AGCCGCTGGA CCTGCGCATC GCGGCCTGCC GCCTCAGCGT GGCGGTGCGC 
GCCGACTACG ACTACGCCTC GGCCGTGAAG CAGGGCTCGC GCCTGAGGGT CGCCACCAAG 
TATGTGGGCC TTGCACGCGA GTTTTTCGCG AGCAAGGGCG TGCACGTCGA CCTGATCAAG 
CTCTACGGCA GCATGGAGCT CGCGCCGCTC ACCGGCCTGG CCGACGCCAT CGTCGACCTG 
GTCTCGACCG GCAACACGCT CAAGGCCAAT CACCTGGTCG AGGTCGAACG CATCATGGAC 
ATCAGCGCGC GCCTCGTGGT CAACCAGGCC GCGCTCAAGC TCAAGCGCGA GCCGATCCGC 
CGCATCATCG ACGCCTTTGC GTCGGCCATT CCCACTGCCT GA 

 

Protein sequence

MITLALSKGR IFEETMPLLA AAGIEVTEDP EKSRKLILAT TRPDVRVVLV RASDVPTYVQ 
YGGADLGVTG LDVLLENGNQ GMYQPLDLRI AACRLSVAVR ADYDYASAVK QGSRLRVATK 
YVGLAREFFA SKGVHVDLIK LYGSMELAPL TGLADAIVDL VSTGNTLKAN HLVEVERIMD 
ISARLVVNQA ALKLKREPIR RIIDAFASAI PTA